RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W GCN20P43535 752 aaKnown RBP5.28□□□□□ -1.56
PRE3YJL001W IRC7P43623 340 aa5.28□□□□□ -1.56
PRE3YJL001W TRS85P46944 698 aa5.28□□□□□ -1.56
PRE3YJL001W DPB11P47027 764 aaPredicted RBP5.28□□□□□ -1.56
PRE3YJL001W UBC13P52490 153 aa5.28□□□□□ -1.56
PRE3YJL001W BRR6P53062 197 aa5.28□□□□□ -1.56
PRE3YJL001W YNR062CP53748 327 aa5.28□□□□□ -1.56
PRE3YJL001W TPS1Q00764 495 aaKnown RBP5.28□□□□□ -1.56
PRE3YJL001W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.28□□□□□ -1.56not detected
PRE3YJL001W PET191Q02772 108 aa5.28□□□□□ -1.56
PRE3YJL001W DYN3Q04949 312 aa5.28□□□□□ -1.56
PRE3YJL001W RNH202Q05635 350 aa5.28□□□□□ -1.56
PRE3YJL001W IZH2Q12442 317 aa5.28□□□□□ -1.56
PRE3YJL001W FSH3Q99369 266 aa5.28□□□□□ -1.56
PRE3YJL001W MSI1P13712 422 aa5.27□□□□□ -1.57
PRE3YJL001W SPO7P18410 259 aa5.27□□□□□ -1.57
PRE3YJL001W URE2P23202 354 aaKnown RBP5.27□□□□□ -1.57
PRE3YJL001W RHB1P25378 209 aa5.27□□□□□ -1.57
PRE3YJL001W MDH3P32419 343 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
PRE3YJL001W RPN2P32565 945 aaKnown RBP5.27□□□□□ -1.57
PRE3YJL001W SIP1P32578 815 aa5.27□□□□□ -1.57
PRE3YJL001W HCS1P34243 683 aa5.27□□□□□ -1.57
PRE3YJL001W YKL102CP34249 101 aa5.27□□□□□ -1.57
PRE3YJL001W RFC3P38629 340 aa5.27□□□□□ -1.57
PRE3YJL001W MPM1P40364 252 aa5.27□□□□□ -1.57
PRE3YJL001W YIL166CP40445 542 aa5.27□□□□□ -1.57
PRE3YJL001W NAS2P40555 220 aa5.27□□□□□ -1.57
PRE3YJL001W YIP5P53108 310 aa5.27□□□□□ -1.57
PRE3YJL001W CPR8P53728 308 aa5.27□□□□□ -1.57
PRE3YJL001W GTB1Q04924 702 aa5.27□□□□□ -1.57
PRE3YJL001W CTS2Q06350 511 aa5.27□□□□□ -1.57
PRE3YJL001W THP1Q08231 455 aa5.27□□□□□ -1.57
PRE3YJL001W HRT1Q08273 121 aa5.27□□□□□ -1.57
PRE3YJL001W SKI7Q08491 747 aaPredicted RBP5.27□□□□□ -1.57
PRE3YJL001W MUM3Q08750 479 aa5.27□□□□□ -1.57
PRE3YJL001W YDL199CQ12407 687 aa5.27□□□□□ -1.57
PRE3YJL001W RTN2Q12443 393 aa5.27□□□□□ -1.57
PRE3YJL001W ERG27Q12452 347 aaKnown RBP5.27□□□□□ -1.57
PRE3YJL001W PPA2P28239 310 aa5.26□□□□□ -1.57
PRE3YJL001W PUP2P32379 260 aa5.26□□□□□ -1.57
PRE3YJL001W PAD1P33751 242 aaKnown RBP RIP-Chip data5.26□□□□□ -1.57not detected
PRE3YJL001W CUE2P36075 443 aaKnown RBP5.26□□□□□ -1.57
PRE3YJL001W IMO32P53219 342 aa5.26□□□□□ -1.57
PRE3YJL001W YNL046WP53956 172 aa5.26□□□□□ -1.57
PRE3YJL001W PRM15Q03262 622 aa5.26□□□□□ -1.57
PRE3YJL001W YDL242WQ07746 117 aa5.26□□□□□ -1.57
PRE3YJL001W SWT1Q12104 458 aa5.26□□□□□ -1.57
PRE3YJL001W FRE8Q12209 686 aa5.26□□□□□ -1.57
PRE3YJL001W WTM1Q12363 437 aaKnown RBP5.26□□□□□ -1.57
PRE3YJL001W MRX4Q12467 430 aa5.26□□□□□ -1.57
PRE3YJL001W MRP20P32387 263 aa5.25□□□□□ -1.57
PRE3YJL001W GSH1P32477 678 aa5.25□□□□□ -1.57
PRE3YJL001W VMA11P32842 164 aa5.25□□□□□ -1.57
PRE3YJL001W YGL117WP53133 265 aa5.25□□□□□ -1.57
PRE3YJL001W COG2P53271 262 aa5.25□□□□□ -1.57
PRE3YJL001W RIM9Q04734 239 aa5.25□□□□□ -1.57
PRE3YJL001W SNT309Q06091 175 aaPredicted RBP5.25□□□□□ -1.57
PRE3YJL001W TPO3Q06451 622 aa5.25□□□□□ -1.57
PRE3YJL001W PSR1Q07800 427 aa5.25□□□□□ -1.57
PRE3YJL001W CSI2Q08054 341 aa5.25□□□□□ -1.57
PRE3YJL001W APC2Q12440 853 aa5.25□□□□□ -1.57
PRE3YJL001W CDC31P06704 161 aaKnown RBP5.24□□□□□ -1.57
PRE3YJL001W PET9P18239 318 aaKnown RBP5.24□□□□□ -1.57
PRE3YJL001W IDH1P28834 360 aaKnown RBP RIP-Chip data5.24□□□□□ -1.57not detected
PRE3YJL001W ARC19P33204 171 aaKnown RBP5.24□□□□□ -1.57
PRE3YJL001W NUF2P33895 451 aa5.24□□□□□ -1.57
PRE3YJL001W MTH1P35198 433 aa5.24□□□□□ -1.57
PRE3YJL001W SRO77P38163 1010 aa5.24□□□□□ -1.57
PRE3YJL001W YHR218WP38899 603 aa5.24□□□□□ -1.57
PRE3YJL001W PSD1P39006 500 aa5.24□□□□□ -1.57
PRE3YJL001W BUR6P40096 142 aa5.24□□□□□ -1.57
PRE3YJL001W SLI1P53304 468 aa5.24□□□□□ -1.57
PRE3YJL001W COS1P53822 381 aa5.24□□□□□ -1.57
PRE3YJL001W YNL033WP53964 284 aa5.24□□□□□ -1.57
PRE3YJL001W YNL019CP53975 284 aa5.24□□□□□ -1.57
PRE3YJL001W YPL077CQ02831 240 aa5.24□□□□□ -1.57
PRE3YJL001W DML1Q03652 475 aa5.24□□□□□ -1.57
PRE3YJL001W YDR387CQ04162 555 aa5.24□□□□□ -1.57
PRE3YJL001W GMC1Q04399 608 aa5.24□□□□□ -1.57
PRE3YJL001W PIN3Q06449 215 aa5.24□□□□□ -1.57
PRE3YJL001W MIM1Q08176 113 aa5.24□□□□□ -1.57
PRE3YJL001W ULA1Q12059 462 aa5.24□□□□□ -1.57
PRE3YJL001W SIA1Q12212 622 aa5.24□□□□□ -1.57
PRE3YJL001W VCX1Q99385 411 aa5.24□□□□□ -1.57
PRE3YJL001W RAD7P06779 565 aa5.23□□□□□ -1.57
PRE3YJL001W YML003WP0CF16 290 aa5.23□□□□□ -1.57
PRE3YJL001W YOL162WP0CF19 215 aa5.23□□□□□ -1.57
PRE3YJL001W HNM1P19807 563 aa5.23□□□□□ -1.57
PRE3YJL001W CDC10P25342 322 aaKnown RBP5.23□□□□□ -1.57
PRE3YJL001W POL4P25615 582 aa5.23□□□□□ -1.57
PRE3YJL001W RIB1P38066 345 aa5.23□□□□□ -1.57
PRE3YJL001W BAT2P47176 376 aaKnown RBP5.23□□□□□ -1.57
PRE3YJL001W SRB7P47822 140 aa5.23□□□□□ -1.57
PRE3YJL001W USE1P53146 245 aa5.23□□□□□ -1.57
PRE3YJL001W APM1Q00776 475 aaPredicted RBP5.23□□□□□ -1.57
PRE3YJL001W YDR391CQ04170 232 aa5.23□□□□□ -1.57
PRE3YJL001W DBP9Q06218 594 aaKnown RBP5.23□□□□□ -1.57
PRE3YJL001W TAZ1Q06510 381 aa5.23□□□□□ -1.57
PRE3YJL001W NDL1Q06568 189 aa5.23□□□□□ -1.57
PRE3YJL001W IPK1Q06667 281 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms