RNA–Protein interactions for RNA: YHR200W

RPN10, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN10, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN10YHR200W YDR102CQ03864 110 aa12.3□□□□□ -0.44
RPN10YHR200W RSM24Q03976 319 aa12.3□□□□□ -0.44
RPN10YHR200W PRB1P09232 635 aa12.29□□□□□ -0.44
RPN10YHR200W RIB7P33312 244 aa12.29□□□□□ -0.44
RPN10YHR200W SOF1P33750 489 aaKnown RBP12.29□□□□□ -0.44
RPN10YHR200W SEC66P33754 206 aa12.29□□□□□ -0.44
RPN10YHR200W RCN1P36054 211 aa12.29□□□□□ -0.44
RPN10YHR200W RPS26AP39938 119 aaKnown RBP12.29□□□□□ -0.44
RPN10YHR200W RPS26BP39939 119 aaKnown RBP12.29□□□□□ -0.44
RPN10YHR200W TPN1P53099 579 aa12.29□□□□□ -0.44
RPN10YHR200W MRPL19P53875 158 aa12.29□□□□□ -0.44
RPN10YHR200W TPO3Q06451 622 aa12.29□□□□□ -0.44
RPN10YHR200W MRPL35Q06678 367 aa12.29□□□□□ -0.44
RPN10YHR200W ATG41Q12048 136 aa12.29□□□□□ -0.44
RPN10YHR200W YRM1Q12340 786 aa12.29□□□□□ -0.44
RPN10YHR200W FLO9P39712 1322 aa12.29□□□□□ -0.44
RPN10YHR200W GLT1Q12680 2145 aaKnown RBP12.28□□□□□ -0.44
RPN10YHR200W MATALPHA1P0CY06 175 aa12.28□□□□□ -0.44
RPN10YHR200W HMLALPHA1P0CY07 175 aa12.28□□□□□ -0.44
RPN10YHR200W ERG9P29704 444 aa12.28□□□□□ -0.44
RPN10YHR200W MSS4P38994 779 aa12.28□□□□□ -0.44
RPN10YHR200W YJR120WP47157 116 aa12.28□□□□□ -0.44
RPN10YHR200W TY1A-BLQ12266 440 aa12.28□□□□□ -0.44
RPN10YHR200W PBS2P08018 668 aa12.27□□□□□ -0.45
RPN10YHR200W HYM1P32464 399 aa12.27□□□□□ -0.45
RPN10YHR200W MRPL39P36533 70 aa12.27□□□□□ -0.45
RPN10YHR200W PTH1P38876 190 aaKnown RBP12.27□□□□□ -0.45
RPN10YHR200W TIR3P40552 269 aa12.27□□□□□ -0.45
RPN10YHR200W PRY1P47032 299 aa12.27□□□□□ -0.45
RPN10YHR200W HSV2P50079 448 aaPredicted RBP12.27□□□□□ -0.45
RPN10YHR200W SOK2P53438 785 aaPredicted RBP12.27□□□□□ -0.45
RPN10YHR200W NRK1P53915 240 aa12.27□□□□□ -0.45
RPN10YHR200W FRM2P37261 193 aa12.26□□□□□ -0.45
RPN10YHR200W CHS7P38843 316 aa12.26□□□□□ -0.45
RPN10YHR200W HPA3P39979 161 aa12.26□□□□□ -0.45
RPN10YHR200W LOH1P47055 219 aa12.26□□□□□ -0.45
RPN10YHR200W LYS20P48570 428 aaKnown RBP12.26□□□□□ -0.45
RPN10YHR200W ASI3P53983 676 aa12.26□□□□□ -0.45
RPN10YHR200W PLB2Q03674 706 aa12.26□□□□□ -0.45
RPN10YHR200W YDR387CQ04162 555 aa12.26□□□□□ -0.45
RPN10YHR200W LYS21Q12122 440 aaKnown RBP12.26□□□□□ -0.45
RPN10YHR200W YDL180WQ12301 547 aa12.26□□□□□ -0.45
RPN10YHR200W SSH1P38353 490 aaKnown RBP12.25□□□□□ -0.45
RPN10YHR200W YEL057CP39983 233 aa12.25□□□□□ -0.45
RPN10YHR200W PUG1P40100 303 aa12.25□□□□□ -0.45
RPN10YHR200W ADO1P47143 340 aaKnown RBP12.25□□□□□ -0.45
RPN10YHR200W SCY1P53009 804 aa12.25□□□□□ -0.45
RPN10YHR200W LSM7P53905 115 aaKnown RBP12.25□□□□□ -0.45
RPN10YHR200W RSM23Q01163 450 aa12.25□□□□□ -0.45
RPN10YHR200W GAS2Q06135 555 aa12.25□□□□□ -0.45
RPN10YHR200W SSK1Q07084 712 aa12.25□□□□□ -0.45
RPN10YHR200W TMS1Q12116 473 aa12.25□□□□□ -0.45
RPN10YHR200W GPM1P00950 247 aaKnown RBP12.24□□□□□ -0.45
RPN10YHR200W GCD1P09032 578 aaPredicted RBP12.24□□□□□ -0.45
RPN10YHR200W CDC34P14682 295 aa12.24□□□□□ -0.45
RPN10YHR200W CNE1P27825 502 aa12.24□□□□□ -0.45
RPN10YHR200W PRE4P30657 266 aa12.24□□□□□ -0.45
RPN10YHR200W ERG24P32462 438 aaKnown RBP12.24□□□□□ -0.45
RPN10YHR200W AIM3P38266 947 aaKnown RBP12.24□□□□□ -0.45
RPN10YHR200W HTD2P38790 280 aaKnown RBP12.24□□□□□ -0.45
RPN10YHR200W YIL169CP40442 995 aa12.24□□□□□ -0.45
RPN10YHR200W PHB1P40961 287 aa12.24□□□□□ -0.45
RPN10YHR200W MSE1P48525 536 aa12.24□□□□□ -0.45
RPN10YHR200W RPN14P53196 417 aa12.24□□□□□ -0.45
RPN10YHR200W PCP1P53259 346 aa12.24□□□□□ -0.45
RPN10YHR200W SCW4P53334 386 aaKnown RBP12.24□□□□□ -0.45
RPN10YHR200W AAH1P53909 347 aa12.24□□□□□ -0.45
RPN10YHR200W NMA1Q06178 401 aaKnown RBP12.24□□□□□ -0.45
RPN10YHR200W CYC1P00044 109 aaPredicted RBP12.23□□□□□ -0.45
RPN10YHR200W NAB2P32505 525 aaKnown RBP RIP-Chip data12.23□□□□□ -0.45not detected
RPN10YHR200W SNC2P33328 115 aa12.23□□□□□ -0.45
RPN10YHR200W SYS1P41544 203 aa12.23□□□□□ -0.45
RPN10YHR200W ERJ5P43613 295 aaPredicted RBP12.23□□□□□ -0.45
RPN10YHR200W PXR1P53335 271 aaPredicted RBP12.23□□□□□ -0.45
RPN10YHR200W YNL165WP53891 406 aa12.23□□□□□ -0.45
RPN10YHR200W GIM3P53900 129 aa12.23□□□□□ -0.45
RPN10YHR200W CTF19Q02732 369 aa12.23□□□□□ -0.45
RPN10YHR200W FRE3Q08905 711 aa12.23□□□□□ -0.45
RPN10YHR200W ORT1Q12375 292 aa12.23□□□□□ -0.45
RPN10YHR200W CDC36P06100 191 aaPredicted RBP12.22□□□□□ -0.45
RPN10YHR200W ADH7P25377 361 aa12.22□□□□□ -0.45
RPN10YHR200W ELA1P53861 379 aaPredicted RBP12.22□□□□□ -0.45
RPN10YHR200W SRP1Q02821 542 aaKnown RBP12.22□□□□□ -0.45
RPN10YHR200W COQ11Q05892 277 aa12.22□□□□□ -0.45
RPN10YHR200W PHO2P07269 559 aa12.21□□□□□ -0.45
RPN10YHR200W GCN3P14741 305 aa12.21□□□□□ -0.45
RPN10YHR200W BUD23P25627 275 aaPredicted RBP12.21□□□□□ -0.45
RPN10YHR200W POP6P53218 158 aa12.21□□□□□ -0.45
RPN10YHR200W ASR1Q06834 288 aa12.21□□□□□ -0.45
RPN10YHR200W SRL2Q12020 392 aa12.21□□□□□ -0.45
RPN10YHR200W RPS16AP0CX51 143 aaKnown RBP12.2□□□□□ -0.46
RPN10YHR200W RPS16BP0CX52 143 aaKnown RBP12.2□□□□□ -0.46
RPN10YHR200W PET54P10834 293 aa12.2□□□□□ -0.46
RPN10YHR200W RPS0BP46654 252 aaKnown RBP12.2□□□□□ -0.46
RPN10YHR200W YJL016WP47072 561 aa12.2□□□□□ -0.46
RPN10YHR200W YGL260WP53056 76 aa12.2□□□□□ -0.46
RPN10YHR200W PHO92Q06390 306 aa12.2□□□□□ -0.46
RPN10YHR200W SCM3Q12334 223 aa12.2□□□□□ -0.46
RPN10YHR200W MRT4P33201 236 aaKnown RBP12.19□□□□□ -0.46
RPN10YHR200W YBR242WP38331 238 aa12.19□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 51.7 ms