RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W CSG2P35206 410 aa1.19□□□□□ -2.22
RPF1YHR088W SWD2P36104 329 aaPredicted RBP1.19□□□□□ -2.22
RPF1YHR088W YDR089WP38966 869 aa1.19□□□□□ -2.22
RPF1YHR088W AIM20P40451 204 aa1.19□□□□□ -2.22
RPF1YHR088W GTO1P48239 356 aa1.19□□□□□ -2.22
RPF1YHR088W DAD3P69850 94 aa1.19□□□□□ -2.22
RPF1YHR088W YMR209CQ03648 457 aa1.19□□□□□ -2.22
RPF1YHR088W YOL019WQ08157 551 aa1.19□□□□□ -2.22
RPF1YHR088W SIA1Q12212 622 aa1.19□□□□□ -2.22
RPF1YHR088W RAD3P06839 778 aa1.18□□□□□ -2.22
RPF1YHR088W SCM4P32564 187 aa1.18□□□□□ -2.22
RPF1YHR088W RPS0AP32905 252 aaKnown RBP1.18□□□□□ -2.22
RPF1YHR088W GDH2P33327 1092 aaKnown RBP1.18□□□□□ -2.22
RPF1YHR088W YKL063CP35725 167 aa1.18□□□□□ -2.22
RPF1YHR088W ARN2P38724 620 aa1.18□□□□□ -2.22
RPF1YHR088W SSO2P39926 295 aa1.18□□□□□ -2.22
RPF1YHR088W LSM4P40070 187 aaKnown RBP1.18□□□□□ -2.22
RPF1YHR088W AYR1P40471 297 aa1.18□□□□□ -2.22
RPF1YHR088W GON7P46984 123 aa1.18□□□□□ -2.22
RPF1YHR088W VPS60Q03390 229 aa1.18□□□□□ -2.22
RPF1YHR088W PEX12Q04370 399 aa1.18□□□□□ -2.22
RPF1YHR088W TAF9Q05027 157 aa1.18□□□□□ -2.22
RPF1YHR088W PET494P07390 489 aaPredicted RBP1.17□□□□□ -2.22
RPF1YHR088W CAR2P07991 424 aaKnown RBP1.17□□□□□ -2.22
RPF1YHR088W DPB2P24482 689 aaPredicted RBP1.17□□□□□ -2.22
RPF1YHR088W SMI1P32566 505 aa1.17□□□□□ -2.22
RPF1YHR088W SPT4P32914 102 aaPredicted RBP1.17□□□□□ -2.22
RPF1YHR088W HMT1P38074 348 aa1.17□□□□□ -2.22
RPF1YHR088W YIA6P40556 373 aa1.17□□□□□ -2.22
RPF1YHR088W IBA57P47158 497 aa1.17□□□□□ -2.22
RPF1YHR088W SDC1Q03323 175 aa1.17□□□□□ -2.22
RPF1YHR088W VPS20Q04272 221 aa1.17□□□□□ -2.22
RPF1YHR088W MGR3Q04472 501 aa1.17□□□□□ -2.22
RPF1YHR088W YLR297WQ05899 129 aa1.17□□□□□ -2.22
RPF1YHR088W YPL247CQ12523 523 aa1.17□□□□□ -2.22
RPF1YHR088W PUT1P09368 476 aa1.16□□□□□ -2.22
RPF1YHR088W CAM1P29547 415 aaKnown RBP1.16□□□□□ -2.22
RPF1YHR088W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
RPF1YHR088W TEM1P38987 245 aa1.16□□□□□ -2.22
RPF1YHR088W RIB4P50861 169 aaPredicted RBP1.16□□□□□ -2.22
RPF1YHR088W FMP41P53889 259 aaKnown RBP1.16□□□□□ -2.22
RPF1YHR088W YMR316C-AI2HB70 103 aa1.15□□□□□ -2.23
RPF1YHR088W PEX3P28795 441 aa1.15□□□□□ -2.23
RPF1YHR088W DOA4P32571 926 aa1.15□□□□□ -2.23
RPF1YHR088W END3P39013 349 aa1.15□□□□□ -2.23
RPF1YHR088W AGX1P43567 385 aa1.15□□□□□ -2.23
RPF1YHR088W DBP6P53734 629 aaKnown RBP1.15□□□□□ -2.23
RPF1YHR088W YNL050CP53952 270 aa1.15□□□□□ -2.23
RPF1YHR088W LOA1Q06508 300 aa1.15□□□□□ -2.23
RPF1YHR088W ASR1Q06834 288 aa1.15□□□□□ -2.23
RPF1YHR088W COS2P0CX12 379 aa1.14□□□□□ -2.23
RPF1YHR088W COS3P0CX13 379 aa1.14□□□□□ -2.23
RPF1YHR088W POX1P13711 748 aa1.14□□□□□ -2.23
RPF1YHR088W CCA1P21269 546 aa1.14□□□□□ -2.23
RPF1YHR088W NPT1P39683 429 aaKnown RBP1.14□□□□□ -2.23
RPF1YHR088W TAD2P47058 250 aa1.14□□□□□ -2.23
RPF1YHR088W ASI3P53983 676 aa1.14□□□□□ -2.23
RPF1YHR088W TRM44Q02648 567 aaKnown RBP1.14□□□□□ -2.23
RPF1YHR088W YMR111CQ04461 462 aaPredicted RBP1.14□□□□□ -2.23
RPF1YHR088W SPT7P35177 1332 aa1.14□□□□□ -2.23
RPF1YHR088W YAL064W-BO13512 126 aa1.13□□□□□ -2.23
RPF1YHR088W SAR1P20606 190 aaKnown RBP1.13□□□□□ -2.23
RPF1YHR088W RNP1P32385 249 aa1.13□□□□□ -2.23
RPF1YHR088W YER135CP40082 130 aa1.13□□□□□ -2.23
RPF1YHR088W AGP3P43548 558 aa1.13□□□□□ -2.23
RPF1YHR088W LOC1P43586 204 aaPredicted RBP1.13□□□□□ -2.23
RPF1YHR088W VOA1P53262 265 aa1.13□□□□□ -2.23
RPF1YHR088W RRG8Q06109 277 aa1.13□□□□□ -2.23
RPF1YHR088W GPN3Q06543 272 aa1.13□□□□□ -2.23
RPF1YHR088W ECM13P38195 257 aa1.12□□□□□ -2.23
RPF1YHR088W PEP8P40335 379 aa1.12□□□□□ -2.23
RPF1YHR088W SNX4P47057 423 aa1.12□□□□□ -2.23
RPF1YHR088W YJL028WP47062 111 aa1.12□□□□□ -2.23
RPF1YHR088W KEL2P50090 882 aa1.12□□□□□ -2.23
RPF1YHR088W NIF3P53081 288 aa1.12□□□□□ -2.23
RPF1YHR088W INM2Q05533 292 aa1.12□□□□□ -2.23
RPF1YHR088W BER1Q06688 274 aaKnown RBP1.12□□□□□ -2.23
RPF1YHR088W VAC14Q06708 880 aa1.12□□□□□ -2.23
RPF1YHR088W GEP5Q12393 293 aa1.12□□□□□ -2.23
RPF1YHR088W RPS3P05750 240 aaKnown RBP1.11□□□□□ -2.23
RPF1YHR088W TDA11P38854 504 aa1.11□□□□□ -2.23
RPF1YHR088W YHB1P39676 399 aaKnown RBP1.11□□□□□ -2.23
RPF1YHR088W RPL10P41805 221 aaKnown RBP1.11□□□□□ -2.23
RPF1YHR088W MDM34P53083 459 aa1.11□□□□□ -2.23
RPF1YHR088W SEC10Q06245 871 aa1.11□□□□□ -2.23
RPF1YHR088W POM33Q12164 279 aa1.11□□□□□ -2.23
RPF1YHR088W YOS9Q99220 542 aa1.11□□□□□ -2.23
RPF1YHR088W SAS5Q99314 248 aa1.11□□□□□ -2.23
RPF1YHR088W ILV1P00927 576 aaKnown RBP1.1□□□□□ -2.23
RPF1YHR088W CDC7P06243 507 aa1.1□□□□□ -2.23
RPF1YHR088W SGA1P08019 549 aa1.1□□□□□ -2.23
RPF1YHR088W GCD2P12754 651 aaPredicted RBP1.1□□□□□ -2.23
RPF1YHR088W VMA2P16140 517 aaKnown RBP1.1□□□□□ -2.23
RPF1YHR088W RPC25P35718 212 aa1.1□□□□□ -2.23
RPF1YHR088W DOG1P38774 246 aa1.1□□□□□ -2.23
RPF1YHR088W VPS45P38932 577 aa1.1□□□□□ -2.23
RPF1YHR088W PRO2P54885 456 aaKnown RBP1.1□□□□□ -2.23
RPF1YHR088W AI5_BETAQ9ZZX0 354 aa1.1□□□□□ -2.23
RPF1YHR088W MAL32P38158 584 aa1.09□□□□□ -2.23
RPF1YHR088W SLX9P53251 210 aaPredicted RBP1.09□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms