RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C RRP15Q06511 250 aaPredicted RBP11.3□□□□□ -0.6
SHU1YHL006C YPR196WQ06595 470 aa11.3□□□□□ -0.6
SHU1YHL006C YOR378WQ08902 515 aa11.3□□□□□ -0.6
SHU1YHL006C FRE8Q12209 686 aa11.3□□□□□ -0.6
SHU1YHL006C MSI1P13712 422 aa11.29□□□□□ -0.6
SHU1YHL006C NDC1P32500 655 aa11.29□□□□□ -0.6
SHU1YHL006C AIM10P39965 576 aaKnown RBP11.29□□□□□ -0.6
SHU1YHL006C PUG1P40100 303 aa11.29□□□□□ -0.6
SHU1YHL006C ATF1P40353 525 aa11.29□□□□□ -0.6
SHU1YHL006C CTK2P46962 323 aa11.29□□□□□ -0.6
SHU1YHL006C TAF3Q12297 353 aa11.29□□□□□ -0.6
SHU1YHL006C YBL113CQ7M4S9 792 aa11.29□□□□□ -0.6
SHU1YHL006C RPL39P04650 51 aa11.28□□□□□ -0.6
SHU1YHL006C RPA135P22138 1203 aaKnown RBP11.28□□□□□ -0.6
SHU1YHL006C ECT1P33412 323 aa11.28□□□□□ -0.6
SHU1YHL006C YKR015CP36111 568 aa11.28□□□□□ -0.6
SHU1YHL006C FAT1P38225 669 aa11.28□□□□□ -0.6
SHU1YHL006C AAD14P42884 376 aa11.28□□□□□ -0.6
SHU1YHL006C ILM1P47155 203 aa11.28□□□□□ -0.6
SHU1YHL006C TYW3P53177 273 aa11.28□□□□□ -0.6
SHU1YHL006C SAM50P53969 484 aa11.28□□□□□ -0.6
SHU1YHL006C FIN1Q03898 291 aa11.28□□□□□ -0.6
SHU1YHL006C GMC1Q04399 608 aa11.28□□□□□ -0.6
SHU1YHL006C RNH1Q04740 348 aa11.28□□□□□ -0.6
SHU1YHL006C RKM1Q08961 583 aaPredicted RBP11.28□□□□□ -0.6
SHU1YHL006C YLR108CQ12259 485 aa11.28□□□□□ -0.6
SHU1YHL006C TDH3P00359 332 aaKnown RBP RIP-Chip data11.27□□□□□ -0.61not detected
SHU1YHL006C YML003WP0CF16 290 aa11.27□□□□□ -0.61
SHU1YHL006C FAR1P21268 830 aa11.27□□□□□ -0.61
SHU1YHL006C SSE2P32590 693 aaKnown RBP11.27□□□□□ -0.61
SHU1YHL006C MCH2P36032 473 aa11.27□□□□□ -0.61
SHU1YHL006C YHR035WP38769 630 aa11.27□□□□□ -0.61
SHU1YHL006C ARO9P38840 513 aaPredicted RBP11.27□□□□□ -0.61
SHU1YHL006C CTR2P38865 189 aa11.27□□□□□ -0.61
SHU1YHL006C SDP1P40479 209 aa11.27□□□□□ -0.61
SHU1YHL006C AIR1P40507 360 aaKnown RBP11.27□□□□□ -0.61
SHU1YHL006C PXR1P53335 271 aaPredicted RBP11.27□□□□□ -0.61
SHU1YHL006C TPO3Q06451 622 aa11.27□□□□□ -0.61
SHU1YHL006C YCL048W-AQ2V2Q2 79 aa11.27□□□□□ -0.61
SHU1YHL006C DYN1P36022 4092 aa11.26□□□□□ -0.61
SHU1YHL006C CCW14O13547 238 aa11.26□□□□□ -0.61
SHU1YHL006C RPB9P27999 122 aa11.26□□□□□ -0.61
SHU1YHL006C DEG1P31115 442 aaKnown RBP11.26□□□□□ -0.61
SHU1YHL006C MRT4P33201 236 aaKnown RBP11.26□□□□□ -0.61
SHU1YHL006C FRM2P37261 193 aa11.26□□□□□ -0.61
SHU1YHL006C SHE1P38200 338 aa11.26□□□□□ -0.61
SHU1YHL006C YBR285WP38354 144 aa11.26□□□□□ -0.61
SHU1YHL006C SOP4P39543 234 aaPredicted RBP11.26□□□□□ -0.61
SHU1YHL006C YJL016WP47072 561 aa11.26□□□□□ -0.61
SHU1YHL006C PPT1P53043 513 aa11.26□□□□□ -0.61
SHU1YHL006C YMR087WQ04299 284 aa11.26□□□□□ -0.61
SHU1YHL006C RBS1Q05672 457 aaKnown RBP11.26□□□□□ -0.61
SHU1YHL006C CSI2Q08054 341 aa11.26□□□□□ -0.61
SHU1YHL006C IDP1P21954 428 aaKnown RBP11.25□□□□□ -0.61
SHU1YHL006C PRP21P32524 280 aaPredicted RBP11.25□□□□□ -0.61
SHU1YHL006C MDM31P38880 579 aa11.25□□□□□ -0.61
SHU1YHL006C ABM1P47146 123 aa11.25□□□□□ -0.61
SHU1YHL006C HHT1P61830 136 aa11.25□□□□□ -0.61
SHU1YHL006C YDC1Q02896 317 aa11.25□□□□□ -0.61
SHU1YHL006C GPI17Q04080 534 aa11.25□□□□□ -0.61
SHU1YHL006C NAM2P11325 894 aa11.24□□□□□ -0.61
SHU1YHL006C DLT1Q04216 342 aa11.24□□□□□ -0.61
SHU1YHL006C ARP10Q04549 284 aa11.24□□□□□ -0.61
SHU1YHL006C ISA2Q12425 185 aa11.24□□□□□ -0.61
SHU1YHL006C NOP56Q12460 504 aaKnown RBP RIP-Chip data11.24□□□□□ -0.61not detected
SHU1YHL006C PUT3P25502 979 aaPredicted RBP11.23□□□□□ -0.61
SHU1YHL006C BAP2P38084 609 aa11.23□□□□□ -0.61
SHU1YHL006C CCC1P47818 322 aa11.23□□□□□ -0.61
SHU1YHL006C VMA10P48836 114 aaKnown RBP11.23□□□□□ -0.61
SHU1YHL006C NOG1Q02892 647 aaKnown RBP11.23□□□□□ -0.61
SHU1YHL006C THP3Q12049 470 aaKnown RBP11.23□□□□□ -0.61
SHU1YHL006C AIR2Q12476 344 aaKnown RBP11.23□□□□□ -0.61
SHU1YHL006C YER145C-AA0A023PYF4 145 aa11.22□□□□□ -0.61
SHU1YHL006C SOD2P00447 233 aa11.22□□□□□ -0.61
SHU1YHL006C RPL15AP05748 204 aaKnown RBP11.22□□□□□ -0.61
SHU1YHL006C VMA11P32842 164 aa11.22□□□□□ -0.61
SHU1YHL006C ANR2P36090 516 aaPredicted RBP11.22□□□□□ -0.61
SHU1YHL006C EGD2P38879 174 aaKnown RBP11.22□□□□□ -0.61
SHU1YHL006C YHC3P47040 408 aa11.22□□□□□ -0.61
SHU1YHL006C BNA2P47125 453 aa11.22□□□□□ -0.61
SHU1YHL006C MTL1P53214 551 aa11.22□□□□□ -0.61
SHU1YHL006C YNR048WP53740 393 aa11.22□□□□□ -0.61
SHU1YHL006C RPL15BP54780 204 aaPredicted RBP11.22□□□□□ -0.61
SHU1YHL006C GAL83Q04739 417 aa11.22□□□□□ -0.61
SHU1YHL006C THI2P38141 450 aa11.21□□□□□ -0.61
SHU1YHL006C AAH1P53909 347 aa11.21□□□□□ -0.61
SHU1YHL006C YLR173WQ06247 608 aa11.21□□□□□ -0.61
SHU1YHL006C REC114P32841 428 aa11.2□□□□□ -0.62
SHU1YHL006C SDS22P36047 338 aa11.2□□□□□ -0.62
SHU1YHL006C ARC40P38328 384 aaKnown RBP11.2□□□□□ -0.62
SHU1YHL006C SGN1P40561 250 aaKnown RBP RIP-Chip data11.2□□□□□ -0.62not detected
SHU1YHL006C CIN2P46670 268 aa11.2□□□□□ -0.62
SHU1YHL006C PHB2P50085 310 aa11.2□□□□□ -0.62
SHU1YHL006C SLD3P53135 668 aa11.2□□□□□ -0.62
SHU1YHL006C YDR514CQ04408 483 aa11.2□□□□□ -0.62
SHU1YHL006C YPR098CQ06089 161 aa11.2□□□□□ -0.62
SHU1YHL006C YGK3Q12222 375 aaPredicted RBP11.2□□□□□ -0.62
SHU1YHL006C YGL041W-AP0C5N3 154 aa11.19□□□□□ -0.62
SHU1YHL006C RPL30P14120 105 aaKnown RBP11.19□□□□□ -0.62
SHU1YHL006C APA2P22108 325 aa11.19□□□□□ -0.62
Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms