RNA–Protein interactions for RNA: YGR141W

VPS62, Transcript of Vacuolar protein sorting (VPS) protein, yeastyeast

Gene VPS62, Length 1,404 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS62YGR141W IRC19Q07843 230 aa8.13□□□□□ -1.11
VPS62YGR141W RTK1Q12100 620 aaPredicted RBP8.13□□□□□ -1.11
VPS62YGR141W RPS13P05756 151 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W DAT1P13483 248 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W STP22P25604 385 aa8.12□□□□□ -1.11
VPS62YGR141W MRP17P28778 131 aa8.12□□□□□ -1.11
VPS62YGR141W AIM46P38885 310 aa8.12□□□□□ -1.11
VPS62YGR141W BFR1P38934 470 aaKnown RBP RIP-Chip data8.12□□□□□ -1.11not detected
VPS62YGR141W YPS6P40583 537 aa8.12□□□□□ -1.11
VPS62YGR141W LYS20P48570 428 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W LCL3P53153 274 aa8.12□□□□□ -1.11
VPS62YGR141W MPA43P53583 542 aaPredicted RBP8.12□□□□□ -1.11
VPS62YGR141W YLR152CP54072 576 aa8.12□□□□□ -1.11
VPS62YGR141W ISU1Q03020 165 aa8.12□□□□□ -1.11
VPS62YGR141W GAS2Q06135 555 aa8.12□□□□□ -1.11
VPS62YGR141W YOR385WQ08909 290 aa8.12□□□□□ -1.11
VPS62YGR141W LYS21Q12122 440 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W TAD3Q9URQ3 322 aa8.12□□□□□ -1.11
VPS62YGR141W MSW1P04803 379 aa8.12□□□□□ -1.11
VPS62YGR141W RPL1AP0CX43 217 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W RPL1BP0CX44 217 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W ARF1P11076 181 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W CKS1P20486 150 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W FAA1P30624 700 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W YMR144WP40214 342 aaKnown RBP8.12□□□□□ -1.11
VPS62YGR141W ECL1P48235 211 aa8.12□□□□□ -1.11
VPS62YGR141W HSV2P50079 448 aaPredicted RBP8.12□□□□□ -1.11
VPS62YGR141W OCA1P50946 238 aaPredicted RBP8.12□□□□□ -1.11
VPS62YGR141W UBC12P52491 188 aa8.12□□□□□ -1.11
VPS62YGR141W SLI1P53304 468 aa8.12□□□□□ -1.11
VPS62YGR141W KAP120Q02932 1032 aa8.12□□□□□ -1.11
VPS62YGR141W BNA7Q04066 261 aa8.12□□□□□ -1.11
VPS62YGR141W YLR031WQ07978 186 aa8.12□□□□□ -1.11
VPS62YGR141W FEX2Q08991 375 aa8.12□□□□□ -1.11
VPS62YGR141W ORT1Q12375 292 aa8.12□□□□□ -1.11
VPS62YGR141W YOR343CQ12484 108 aa8.12□□□□□ -1.11
VPS62YGR141W OPI3P05375 206 aa8.11□□□□□ -1.11
VPS62YGR141W CDC26P14724 124 aa8.11□□□□□ -1.11
VPS62YGR141W RPB8P20436 146 aa8.11□□□□□ -1.11
VPS62YGR141W MAG1P22134 296 aaKnown RBP8.11□□□□□ -1.11
VPS62YGR141W SNC2P33328 115 aa8.11□□□□□ -1.11
VPS62YGR141W YKR073CP36153 106 aa8.11□□□□□ -1.11
VPS62YGR141W TCM62P38228 572 aaKnown RBP8.11□□□□□ -1.11
VPS62YGR141W LEU5P38702 357 aa8.11□□□□□ -1.11
VPS62YGR141W CFD1P40558 293 aa8.11□□□□□ -1.11
VPS62YGR141W GTF1P53260 183 aaPredicted RBP8.11□□□□□ -1.11
VPS62YGR141W PBP1P53297 722 aaKnown RBP8.11□□□□□ -1.11
VPS62YGR141W YGR266WP53326 701 aa8.11□□□□□ -1.11
VPS62YGR141W SCW4P53334 386 aaKnown RBP8.11□□□□□ -1.11
VPS62YGR141W CUZ1P53899 274 aa8.11□□□□□ -1.11
VPS62YGR141W NAM8Q00539 523 aaKnown RBP8.11□□□□□ -1.11
VPS62YGR141W TDH2P00358 332 aaKnown RBP8.1□□□□□ -1.11
VPS62YGR141W PUT1P09368 476 aa8.1□□□□□ -1.11
VPS62YGR141W SNF5P18480 905 aa8.1□□□□□ -1.11
VPS62YGR141W HNM1P19807 563 aa8.1□□□□□ -1.11
VPS62YGR141W EHD3P28817 500 aa8.1□□□□□ -1.11
VPS62YGR141W RPC34P32910 317 aa8.1□□□□□ -1.11
VPS62YGR141W FLO10P36170 1169 aa8.1□□□□□ -1.11
VPS62YGR141W DLS1P40366 167 aa8.1□□□□□ -1.11
VPS62YGR141W AVT7P40501 490 aa8.1□□□□□ -1.11
VPS62YGR141W YJR115WP47152 169 aa8.1□□□□□ -1.11
VPS62YGR141W RMD9P53140 646 aaKnown RBP8.1□□□□□ -1.11
VPS62YGR141W JAC1P53193 184 aa8.1□□□□□ -1.11
VPS62YGR141W RSM27P53305 110 aa8.1□□□□□ -1.11
VPS62YGR141W YDR249CQ03787 373 aa8.1□□□□□ -1.11
VPS62YGR141W NNT1Q05874 261 aa8.1□□□□□ -1.11
VPS62YGR141W SYC1Q08553 188 aaPredicted RBP8.1□□□□□ -1.11
VPS62YGR141W TGS1Q12052 315 aa8.1□□□□□ -1.11
VPS62YGR141W YRM1Q12340 786 aa8.1□□□□□ -1.11
VPS62YGR141W YBR085C-AO43137 85 aa8.09□□□□□ -1.11
VPS62YGR141W RPL3P14126 387 aaKnown RBP8.09□□□□□ -1.11
VPS62YGR141W EMP70P32802 667 aa8.09□□□□□ -1.11
VPS62YGR141W UBS1P38290 277 aa8.09□□□□□ -1.11
VPS62YGR141W GEP4P38812 185 aa8.09□□□□□ -1.11
VPS62YGR141W GPP2P40106 250 aaKnown RBP8.09□□□□□ -1.11
VPS62YGR141W NAS2P40555 220 aa8.09□□□□□ -1.11
VPS62YGR141W ASK10P48361 1146 aa8.09□□□□□ -1.11
VPS62YGR141W MIM1Q08176 113 aa8.09□□□□□ -1.11
VPS62YGR141W BDS1Q08347 646 aa8.09□□□□□ -1.11
VPS62YGR141W AEP3Q12089 606 aa8.09□□□□□ -1.11
VPS62YGR141W TMS1Q12116 473 aa8.09□□□□□ -1.11
VPS62YGR141W SCEIP03882 235 aa8.08□□□□□ -1.12
VPS62YGR141W URA6P15700 204 aa8.08□□□□□ -1.12
VPS62YGR141W CPR2P23285 205 aa8.08□□□□□ -1.12
VPS62YGR141W MEK1P24719 497 aaPredicted RBP8.08□□□□□ -1.12
VPS62YGR141W YCR006CP25350 157 aa8.08□□□□□ -1.12
VPS62YGR141W DUT1P33317 147 aa8.08□□□□□ -1.12
VPS62YGR141W SOH1P38633 127 aa8.08□□□□□ -1.12
VPS62YGR141W IDP2P41939 412 aa8.08□□□□□ -1.12
VPS62YGR141W SPG5P42933 373 aa8.08□□□□□ -1.12
VPS62YGR141W YFR054CP43622 192 aa8.08□□□□□ -1.12
VPS62YGR141W GPI14P47088 403 aaKnown RBP8.08□□□□□ -1.12
VPS62YGR141W BRR6P53062 197 aa8.08□□□□□ -1.12
VPS62YGR141W YGR042WP53227 271 aa8.08□□□□□ -1.12
VPS62YGR141W FMP48P53233 369 aa8.08□□□□□ -1.12
VPS62YGR141W SMX3P54999 86 aaPredicted RBP8.08□□□□□ -1.12
VPS62YGR141W ARG5,6Q01217 863 aa8.08□□□□□ -1.12
VPS62YGR141W PEX25Q02969 394 aa8.08□□□□□ -1.12
VPS62YGR141W HNT1Q04344 158 aaKnown RBP8.08□□□□□ -1.12
VPS62YGR141W YPR147CQ06522 304 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 125.5 ms