RNA–Protein interactions for RNA: YGL129C

RSM23, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene RSM23, Length 1,353 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSM23	YGL129C	SNF6	P18888	332 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	TOM40	P23644	387 aa	Known RBP	3.11	□□□□□ -1.91
RSM23	YGL129C	ERG2	P32352	222 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	MRPL40	P36534	297 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	ARN2	P38724	620 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	SER33	P40510	469 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	RPE1	P46969	238 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	KEL2	P50090	882 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	PEX31	P53203	462 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	YNL260C	P53846	198 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	YNL050C	P53952	270 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	VBA1	Q04301	562 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	GPN3	Q06543	272 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	YOL019W	Q08157	551 aa		3.11	□□□□□ -1.91
RSM23	YGL129C	COY1	P34237	679 aa		3.1	□□□□□ -1.91
RSM23	YGL129C	YJR146W	P47174	117 aa		3.1	□□□□□ -1.91
RSM23	YGL129C	COG7	P53195	279 aa		3.1	□□□□□ -1.91
RSM23	YGL129C	ILV1	P00927	576 aa	Known RBP	3.09	□□□□□ -1.92
RSM23	YGL129C	RPP0	P05317	312 aa	Known RBP	3.09	□□□□□ -1.92
RSM23	YGL129C	COS2	P0CX12	379 aa		3.09	□□□□□ -1.92
RSM23	YGL129C	COS3	P0CX13	379 aa		3.09	□□□□□ -1.92
RSM23	YGL129C	FMP33	P46998	180 aa		3.09	□□□□□ -1.92
RSM23	YGL129C	BCP1	Q06338	283 aa		3.09	□□□□□ -1.92
RSM23	YGL129C	YOR268C	Q08734	132 aa		3.09	□□□□□ -1.92
RSM23	YGL129C	VPS68	Q12016	184 aa		3.09	□□□□□ -1.92
RSM23	YGL129C	NUP157	P40064	1391 aa	Known RBP	3.09	□□□□□ -1.92
RSM23	YGL129C	HMT1	P38074	348 aa		3.08	□□□□□ -1.92
RSM23	YGL129C	RDS3	Q06835	107 aa	Predicted RBP	3.08	□□□□□ -1.92
RSM23	YGL129C	PLB3	Q08108	686 aa		3.08	□□□□□ -1.92
RSM23	YGL129C	NOT5	Q12514	560 aa	Predicted RBP	3.08	□□□□□ -1.92
RSM23	YGL129C	RPC40	P07703	335 aa	Known RBP	3.07	□□□□□ -1.92
RSM23	YGL129C	CSG2	P35206	410 aa		3.07	□□□□□ -1.92
RSM23	YGL129C	LSB1	P53281	241 aa		3.07	□□□□□ -1.92
RSM23	YGL129C	CAB4	P53332	305 aa		3.07	□□□□□ -1.92
RSM23	YGL129C	MRPL23	Q12487	163 aa	Predicted RBP	3.07	□□□□□ -1.92
RSM23	YGL129C	DPM1	P14020	267 aa	Known RBP	3.06	□□□□□ -1.92
RSM23	YGL129C	CPD1	P53314	239 aa		3.06	□□□□□ -1.92
RSM23	YGL129C	YMR316C-A	I2HB70	103 aa		3.05	□□□□□ -1.92
RSM23	YGL129C	RPL26A	P05743	127 aa	Known RBP	3.05	□□□□□ -1.92
RSM23	YGL129C	TDA11	P38854	504 aa		3.05	□□□□□ -1.92
RSM23	YGL129C	RPL26B	P53221	127 aa	Known RBP	3.05	□□□□□ -1.92
RSM23	YGL129C	SFH1	Q06168	426 aa		3.05	□□□□□ -1.92
RSM23	YGL129C	ARV1	Q06541	321 aa		3.05	□□□□□ -1.92
RSM23	YGL129C	FMP16	Q12497	93 aa		3.05	□□□□□ -1.92
RSM23	YGL129C	YAL064W-B	O13512	126 aa		3.04	□□□□□ -1.92
RSM23	YGL129C	POF1	P25576	258 aa		3.04	□□□□□ -1.92
RSM23	YGL129C	ISD11	Q6Q560	94 aa		3.04	□□□□□ -1.92
RSM23	YGL129C	RAD10	P06838	210 aa		3.03	□□□□□ -1.92
RSM23	YGL129C	CLB6	P32943	380 aa		3.03	□□□□□ -1.92
RSM23	YGL129C	YKL070W	P36087	169 aa		3.03	□□□□□ -1.92
RSM23	YGL129C	MNN5	P46982	586 aa		3.03	□□□□□ -1.92
RSM23	YGL129C	YJR141W	P47172	347 aa	Predicted RBP	3.03	□□□□□ -1.92
RSM23	YGL129C	ARP5	P53946	755 aa		3.03	□□□□□ -1.92
RSM23	YGL129C	TRM44	Q02648	567 aa	Known RBP	3.03	□□□□□ -1.92
RSM23	YGL129C	PEX3	P28795	441 aa		3.02	□□□□□ -1.93
RSM23	YGL129C	CAM1	P29547	415 aa	Known RBP	3.02	□□□□□ -1.93
RSM23	YGL129C	SEC10	Q06245	871 aa		3.02	□□□□□ -1.93
RSM23	YGL129C	YLR413W	Q06689	675 aa		3.02	□□□□□ -1.93
RSM23	YGL129C	YPL247C	Q12523	523 aa		3.02	□□□□□ -1.93
RSM23	YGL129C	AI5_BETA	Q9ZZX0	354 aa		3.02	□□□□□ -1.93
RSM23	YGL129C	RRT12	P25381	491 aa		3.01	□□□□□ -1.93
RSM23	YGL129C	RRF1	P38771	230 aa		3.01	□□□□□ -1.93
RSM23	YGL129C	NBP35	P52920	328 aa		3.01	□□□□□ -1.93
RSM23	YGL129C	MND1	P53102	219 aa		3.01	□□□□□ -1.93
RSM23	YGL129C	SWS2	P53937	143 aa		3.01	□□□□□ -1.93
RSM23	YGL129C	GRH1	Q04410	372 aa	Known RBP	3.01	□□□□□ -1.93
RSM23	YGL129C	YPL150W	Q12152	901 aa		3.01	□□□□□ -1.93
RSM23	YGL129C	YOS9	Q99220	542 aa		3.01	□□□□□ -1.93
RSM23	YGL129C	YSR3	P23501	404 aa		3	□□□□□ -1.93
RSM23	YGL129C	DSK2	P48510	373 aa		3	□□□□□ -1.93
RSM23	YGL129C	ERV25	P54837	211 aa	Known RBP	3	□□□□□ -1.93
RSM23	YGL129C	YEL009C-A	A0A023PZF2	135 aa		3	□□□□□ -1.93
RSM23	YGL129C	ICL1	P28240	557 aa	Predicted RBP	3	□□□□□ -1.93
RSM23	YGL129C	GDH2	P33327	1092 aa	Known RBP	3	□□□□□ -1.93
RSM23	YGL129C	YHI9	P38765	294 aa		3	□□□□□ -1.93
RSM23	YGL129C	CGI121	Q03705	181 aa	Known RBP	3	□□□□□ -1.93
RSM23	YGL129C	ATC1	Q04005	294 aa		3	□□□□□ -1.93
RSM23	YGL129C	BMH1	P29311	267 aa	Known RBP	2.99	□□□□□ -1.93
RSM23	YGL129C	YHL049C	P38722	271 aa		2.99	□□□□□ -1.93
RSM23	YGL129C	SPP2	Q02521	185 aa		2.99	□□□□□ -1.93
RSM23	YGL129C	NPT1	P39683	429 aa	Known RBP	2.98	□□□□□ -1.93
RSM23	YGL129C	GON7	P46984	123 aa		2.98	□□□□□ -1.93
RSM23	YGL129C	MDM34	P53083	459 aa		2.98	□□□□□ -1.93
RSM23	YGL129C	MYO5	Q04439	1219 aa	Known RBP	2.98	□□□□□ -1.93
RSM23	YGL129C	YMR114C	Q04471	368 aa	Known RBP	2.98	□□□□□ -1.93
RSM23	YGL129C	SUE1	Q06524	206 aa		2.98	□□□□□ -1.93
RSM23	YGL129C	YHR045W	P38775	560 aa		2.97	□□□□□ -1.93
RSM23	YGL129C	YJL028W	P47062	111 aa		2.97	□□□□□ -1.93
RSM23	YGL129C	DAN1	P47178	298 aa		2.97	□□□□□ -1.93
RSM23	YGL129C	RPL4A	P10664	362 aa	Known RBP	2.96	□□□□□ -1.94
RSM23	YGL129C	PPH21	P23594	369 aa		2.96	□□□□□ -1.94
RSM23	YGL129C	DPB2	P24482	689 aa	Predicted RBP	2.96	□□□□□ -1.94
RSM23	YGL129C	DAL80	P26343	269 aa		2.96	□□□□□ -1.94
RSM23	YGL129C	RPL4B	P49626	362 aa	Known RBP	2.96	□□□□□ -1.94
RSM23	YGL129C	MNT4	P53745	580 aa		2.96	□□□□□ -1.94
RSM23	YGL129C	EMI1	Q04406	187 aa		2.96	□□□□□ -1.94
RSM23	YGL129C	SFC1	P33303	322 aa		2.95	□□□□□ -1.94
RSM23	YGL129C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	RIP-Chip
RSM23	YGL129C	COG3	P40094	801 aa		2.95	□□□□□ -1.94
RSM23	YGL129C	AGX1	P43567	385 aa		2.95	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 26 ms