RNA–Protein interactions for RNA: YER123W

YCK3, Transcript of Palmitoylated vacuolar membrane-localized casein kinase I isoform, yeastyeast

Gene YCK3, Length 1,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YCK3YER123W SPS100P13130 326 aa0.82□□□□□ -2.28
YCK3YER123W COQ1P18900 473 aa0.82□□□□□ -2.28
YCK3YER123W CKI1P20485 582 aa0.82□□□□□ -2.28
YCK3YER123W MDL1P33310 695 aa0.82□□□□□ -2.28
YCK3YER123W MRPS5P33759 307 aa0.82□□□□□ -2.28
YCK3YER123W YER084WP40057 128 aa0.82□□□□□ -2.28
YCK3YER123W DSE1P40077 573 aa0.82□□□□□ -2.28
YCK3YER123W PCL7P40186 285 aa0.82□□□□□ -2.28
YCK3YER123W PMT4P46971 762 aa0.82□□□□□ -2.28
YCK3YER123W NBP1P52919 319 aaPredicted RBP0.82□□□□□ -2.28
YCK3YER123W TPC1P53257 314 aa0.82□□□□□ -2.28
YCK3YER123W NAT4Q04751 285 aa0.82□□□□□ -2.28
YCK3YER123W APC5Q08683 685 aa0.82□□□□□ -2.28
YCK3YER123W Q0297Q9ZZV8 51 aa0.82□□□□□ -2.28
YCK3YER123W ERG9P29704 444 aa0.81□□□□□ -2.28
YCK3YER123W YKL102CP34249 101 aa0.81□□□□□ -2.28
YCK3YER123W KTI12P34253 313 aaKnown RBP0.81□□□□□ -2.28
YCK3YER123W TDA11P38854 504 aa0.81□□□□□ -2.28
YCK3YER123W FET3P38993 636 aa0.81□□□□□ -2.28
YCK3YER123W SYF2P53277 215 aaPredicted RBP0.81□□□□□ -2.28
YCK3YER123W YNL095CP53932 642 aa0.81□□□□□ -2.28
YCK3YER123W ALG11P53954 548 aaKnown RBP0.81□□□□□ -2.28
YCK3YER123W UBR1P19812 1950 aa0.8□□□□□ -2.28
YCK3YER123W PDR18P53756 1333 aa0.8□□□□□ -2.28
YCK3YER123W UTR1P21373 530 aa0.8□□□□□ -2.28
YCK3YER123W MXR2P25566 168 aa0.8□□□□□ -2.28
YCK3YER123W TAF14P35189 244 aa0.8□□□□□ -2.28
YCK3YER123W MAL32P38158 584 aa0.8□□□□□ -2.28
YCK3YER123W ACT1P60010 375 aaKnown RBP0.8□□□□□ -2.28
YCK3YER123W MIM1Q08176 113 aa0.8□□□□□ -2.28
YCK3YER123W YOR342CQ12182 319 aa0.8□□□□□ -2.28
YCK3YER123W PAR32Q12515 295 aaKnown RBP0.8□□□□□ -2.28
YCK3YER123W HSP82P02829 709 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W RAD1P06777 1100 aa0.79□□□□□ -2.28
YCK3YER123W THR4P16120 514 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W CDC42P19073 191 aa0.79□□□□□ -2.28
YCK3YER123W HMX1P32339 317 aa0.79□□□□□ -2.28
YCK3YER123W IML3P38265 245 aa0.79□□□□□ -2.28
YCK3YER123W EDC2P40023 145 aaPredicted RBP0.79□□□□□ -2.28
YCK3YER123W YHC3P47040 408 aa0.79□□□□□ -2.28
YCK3YER123W RSC1P53236 928 aa0.79□□□□□ -2.28
YCK3YER123W LSB1P53281 241 aa0.79□□□□□ -2.28
YCK3YER123W MAL12P53341 584 aa0.79□□□□□ -2.28
YCK3YER123W HCH1P53834 153 aa0.79□□□□□ -2.28
YCK3YER123W CWC21Q03375 135 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W RNH1Q04740 348 aa0.79□□□□□ -2.28
YCK3YER123W YMR310CQ04867 317 aaPredicted RBP0.79□□□□□ -2.28
YCK3YER123W PLB3Q08108 686 aa0.79□□□□□ -2.28
YCK3YER123W ERP4Q12450 207 aa0.79□□□□□ -2.28
YCK3YER123W TFB5Q3E7C1 72 aaPredicted RBP0.79□□□□□ -2.28
YCK3YER123W SLH1P53327 1967 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W REP1P03871 373 aa0.79□□□□□ -2.28
YCK3YER123W CBP2P03874 630 aaPredicted RBP0.79□□□□□ -2.28
YCK3YER123W YOL163WP0CF20 169 aa0.79□□□□□ -2.28
YCK3YER123W YAK1P14680 807 aa0.79□□□□□ -2.28
YCK3YER123W PPH21P23594 369 aa0.79□□□□□ -2.28
YCK3YER123W LRP1P38801 184 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W YER188WP40103 239 aa0.79□□□□□ -2.28
YCK3YER123W SEC28P40509 296 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W FYV8P46949 817 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W BAT2P47176 376 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W NBP35P52920 328 aa0.79□□□□□ -2.28
YCK3YER123W UFD1P53044 361 aa0.79□□□□□ -2.28
YCK3YER123W YNR068CP53754 272 aa0.79□□□□□ -2.28
YCK3YER123W EOS1P53938 366 aa0.79□□□□□ -2.28
YCK3YER123W MRX9Q07349 420 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W DTD1Q07648 150 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W YOR283WQ12040 230 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W YPL245WQ12179 454 aaKnown RBP0.79□□□□□ -2.28
YCK3YER123W PRM4Q12498 284 aa0.79□□□□□ -2.28
YCK3YER123W RAD50P12753 1312 aa0.78□□□□□ -2.28
YCK3YER123W OM45P16547 393 aa0.78□□□□□ -2.29
YCK3YER123W VPS3P23643 1011 aa0.78□□□□□ -2.29
YCK3YER123W PRE7P23724 241 aaKnown RBP0.78□□□□□ -2.29
YCK3YER123W DCC1P25559 380 aa0.78□□□□□ -2.29
YCK3YER123W YCR102CP25608 368 aa0.78□□□□□ -2.29
YCK3YER123W FAA1P30624 700 aaKnown RBP0.78□□□□□ -2.29
YCK3YER123W CAB3P36076 571 aa0.78□□□□□ -2.29
YCK3YER123W DAD2P36162 133 aa0.78□□□□□ -2.29
YCK3YER123W MRX3P38172 270 aa0.78□□□□□ -2.29
YCK3YER123W PEX32P38292 413 aa0.78□□□□□ -2.29
YCK3YER123W MMS21P38632 267 aa0.78□□□□□ -2.29
YCK3YER123W YHR122WP38829 231 aa0.78□□□□□ -2.29
YCK3YER123W AVT2P39981 480 aa0.78□□□□□ -2.29
YCK3YER123W RCF1Q03713 159 aa0.78□□□□□ -2.29
YCK3YER123W BCY1P07278 416 aaKnown RBP0.77□□□□□ -2.29
YCK3YER123W YJL197C-AP0C5P0 93 aa0.77□□□□□ -2.29
YCK3YER123W YLL053CP0CD98 152 aa0.77□□□□□ -2.29
YCK3YER123W UBA1P22515 1024 aaKnown RBP0.77□□□□□ -2.29
YCK3YER123W VPH2P32341 215 aa0.77□□□□□ -2.29
YCK3YER123W SUR1P33300 382 aa0.77□□□□□ -2.29
YCK3YER123W PES4P39684 611 aa0.77□□□□□ -2.29
YCK3YER123W YMR134WP40207 237 aa0.77□□□□□ -2.29
YCK3YER123W RPA34P47006 233 aaPredicted RBP0.77□□□□□ -2.29
YCK3YER123W YGR016WP53209 190 aa0.77□□□□□ -2.29
YCK3YER123W ATG10Q07879 167 aa0.77□□□□□ -2.29
YCK3YER123W PER33Q12144 273 aa0.77□□□□□ -2.29
YCK3YER123W TIM22Q12328 207 aa0.77□□□□□ -2.29
YCK3YER123W YDR262WQ12331 272 aa0.77□□□□□ -2.29
YCK3YER123W YOR012WQ12351 137 aa0.77□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 55.5 ms