RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C SRP102P36057 244 aaPredicted RBP2.05□□□□□ -2.08
SSD1YDR293C PAU24P38155 120 aa2.05□□□□□ -2.08
SSD1YDR293C YHK8P38776 514 aa2.05□□□□□ -2.08
SSD1YDR293C ARO9P38840 513 aaPredicted RBP2.05□□□□□ -2.08
SSD1YDR293C HRB1P38922 454 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
SSD1YDR293C VMA7P39111 118 aa2.05□□□□□ -2.08
SSD1YDR293C PHO90P39535 881 aa2.05□□□□□ -2.08
SSD1YDR293C RFC4P40339 323 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C SFH5P47008 294 aa2.05□□□□□ -2.08
SSD1YDR293C TAF4P50105 388 aa2.05□□□□□ -2.08
SSD1YDR293C YLR152CP54072 576 aa2.05□□□□□ -2.08
SSD1YDR293C YMR099CQ03161 297 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C OST6Q03723 332 aa2.05□□□□□ -2.08
SSD1YDR293C DIC1Q06143 298 aa2.05□□□□□ -2.08
SSD1YDR293C SDO1Q07953 250 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C RAX1Q08760 435 aa2.05□□□□□ -2.08
SSD1YDR293C TY1A-NL1Q12391 440 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C YDR157WA0A023PZE8 133 aa2.05□□□□□ -2.08
SSD1YDR293C MSF1P08425 469 aa2.05□□□□□ -2.08
SSD1YDR293C PUT1P09368 476 aa2.05□□□□□ -2.08
SSD1YDR293C SSA3P09435 649 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C VPS33P20795 691 aa2.05□□□□□ -2.08
SSD1YDR293C AIM17P23180 465 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C SHE1P38200 338 aa2.05□□□□□ -2.08
SSD1YDR293C YBR292CP38357 123 aa2.05□□□□□ -2.08
SSD1YDR293C SDP1P40479 209 aa2.05□□□□□ -2.08
SSD1YDR293C YIR016WP40572 265 aa2.05□□□□□ -2.08
SSD1YDR293C NIF3P53081 288 aa2.05□□□□□ -2.08
SSD1YDR293C ERV29P53337 310 aa2.05□□□□□ -2.08
SSD1YDR293C PLP1Q04004 230 aa2.05□□□□□ -2.08
SSD1YDR293C COX20Q04935 205 aa2.05□□□□□ -2.08
SSD1YDR293C NOC4Q06512 552 aaPredicted RBP2.05□□□□□ -2.08
SSD1YDR293C GSH2Q08220 491 aa2.05□□□□□ -2.08
SSD1YDR293C NIP7Q08962 181 aaKnown RBP2.05□□□□□ -2.08
SSD1YDR293C YDL007C-AQ2V2Q0 85 aa2.05□□□□□ -2.08
SSD1YDR293C IPP1P00817 287 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C UTR1P21373 530 aa2.04□□□□□ -2.08
SSD1YDR293C MRPL9P31334 269 aa2.04□□□□□ -2.08
SSD1YDR293C PMT2P31382 759 aa2.04□□□□□ -2.08
SSD1YDR293C MKK1P32490 508 aa2.04□□□□□ -2.08
SSD1YDR293C SRB6P32570 121 aa2.04□□□□□ -2.08
SSD1YDR293C RPS0AP32905 252 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C SUI1P32911 108 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C MDL1P33310 695 aa2.04□□□□□ -2.08
SSD1YDR293C SKN1P33336 771 aa2.04□□□□□ -2.08
SSD1YDR293C CBT1P36038 271 aaPredicted RBP2.04□□□□□ -2.08
SSD1YDR293C ATP3P38077 311 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C SSN8P47821 323 aa2.04□□□□□ -2.08
SSD1YDR293C ERG25P53045 309 aa2.04□□□□□ -2.08
SSD1YDR293C YGR042WP53227 271 aa2.04□□□□□ -2.08
SSD1YDR293C NCE103P53615 221 aa2.04□□□□□ -2.08
SSD1YDR293C CWC25P53854 179 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C SAM50P53969 484 aa2.04□□□□□ -2.08
SSD1YDR293C MSC1Q03104 513 aa2.04□□□□□ -2.08
SSD1YDR293C SNZ1Q03148 297 aa2.04□□□□□ -2.08
SSD1YDR293C DML1Q03652 475 aa2.04□□□□□ -2.08
SSD1YDR293C HNT1Q04344 158 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C YML053CQ04978 212 aa2.04□□□□□ -2.08
SSD1YDR293C RRP45Q05636 305 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C YLR179CQ06252 201 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C AIM6Q07716 390 aa2.04□□□□□ -2.08
SSD1YDR293C SYC1Q08553 188 aaPredicted RBP2.04□□□□□ -2.08
SSD1YDR293C THI72Q08579 599 aa2.04□□□□□ -2.08
SSD1YDR293C FRE5Q08908 694 aa2.04□□□□□ -2.08
SSD1YDR293C USB1Q12208 290 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C BBP1Q12365 385 aa2.04□□□□□ -2.08
SSD1YDR293C TFB5Q3E7C1 72 aaPredicted RBP2.04□□□□□ -2.08
SSD1YDR293C ARG81P05085 880 aa2.04□□□□□ -2.08
SSD1YDR293C YPK2P18961 677 aa2.04□□□□□ -2.08
SSD1YDR293C MRP17P28778 131 aa2.04□□□□□ -2.08
SSD1YDR293C EHD3P28817 500 aa2.04□□□□□ -2.08
SSD1YDR293C PEX2P32800 271 aa2.04□□□□□ -2.08
SSD1YDR293C SPT10P35208 640 aa2.04□□□□□ -2.08
SSD1YDR293C COS9P36034 407 aa2.04□□□□□ -2.08
SSD1YDR293C TRS20P38334 175 aa2.04□□□□□ -2.08
SSD1YDR293C YJL193WP39542 402 aa2.04□□□□□ -2.08
SSD1YDR293C SEN34P39707 275 aa2.04□□□□□ -2.08
SSD1YDR293C SPC25P40014 221 aa2.04□□□□□ -2.08
SSD1YDR293C PGD1P40356 397 aa2.04□□□□□ -2.08
SSD1YDR293C BAP3P41815 604 aa2.04□□□□□ -2.08
SSD1YDR293C GNA1P43577 159 aaPredicted RBP2.04□□□□□ -2.08
SSD1YDR293C YGR079WP53249 370 aa2.04□□□□□ -2.08
SSD1YDR293C MPP6P53725 186 aaPredicted RBP2.04□□□□□ -2.08
SSD1YDR293C TIM44Q01852 431 aa2.04□□□□□ -2.08
SSD1YDR293C SNX41Q04053 625 aa2.04□□□□□ -2.08
SSD1YDR293C THI74Q04083 370 aa2.04□□□□□ -2.08
SSD1YDR293C TY1A-BLQ12266 440 aa2.04□□□□□ -2.08
SSD1YDR293C HTZ1Q12692 134 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C HIS3P06633 220 aa2.04□□□□□ -2.08
SSD1YDR293C DST1P07273 309 aa2.04□□□□□ -2.08
SSD1YDR293C SUA5P32579 426 aa2.04□□□□□ -2.08
SSD1YDR293C RMD6P39975 231 aa2.04□□□□□ -2.08
SSD1YDR293C PTR3P43606 678 aa2.04□□□□□ -2.08
SSD1YDR293C TIS11P47977 285 aa2.04□□□□□ -2.08
SSD1YDR293C YNR071CP53757 342 aa2.04□□□□□ -2.08
SSD1YDR293C ASI3P53983 676 aa2.04□□□□□ -2.08
SSD1YDR293C ACT1P60010 375 aaKnown RBP2.04□□□□□ -2.08
SSD1YDR293C DID2P69771 204 aa2.04□□□□□ -2.08
SSD1YDR293C MRPS17Q03246 237 aaPredicted RBP2.04□□□□□ -2.08
SSD1YDR293C MAK3Q03503 176 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms