RNA–Protein interactions for RNA: YDR261W-B

YDR261W-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YDR261W-B, Length 5,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR261W-BYDR261W-B SNO1Q03144 224 aa2.45□□□□□ -2.02
YDR261W-BYDR261W-B SEI1Q06058 285 aa2.45□□□□□ -2.02
YDR261W-BYDR261W-B JLP1Q12358 412 aa2.45□□□□□ -2.02
YDR261W-BYDR261W-B RPS8AP0CX39 200 aaKnown RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B RPS8BP0CX40 200 aaKnown RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B NDT80P38830 627 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B COX14P39103 70 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B PEX22P39718 180 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B ERG13P54839 491 aaKnown RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B ESA1Q08649 445 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B TRP1P00912 224 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B TDA11P38854 504 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B SUR2P38992 349 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B COX15P40086 486 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B GMC1Q04399 608 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B YNG1Q08465 219 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B TIR4Q12218 487 aaPredicted RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B TPO4Q12256 659 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B RPS18AP0CX55 146 aaKnown RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B RPS18BP0CX56 146 aaPredicted RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B ASP3-2P0CX77 362 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B ASP3-3P0CX78 362 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B ASP3-4P0CX79 362 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B ASP3-1P0CZ17 362 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B CDC13P32797 924 aaKnown RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B YCR087C-AP37263 153 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B MCM22P47167 239 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B NUP57P48837 541 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B SHY1P53266 389 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B VPS60Q03390 229 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B ATP16Q12165 160 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B YLR460CP54007 376 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B THI7Q05998 598 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B YOL163WP0CF20 169 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B DBP7P36120 742 aaKnown RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B NAT2P37293 288 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B SHC1P39000 512 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B PAN6P40459 309 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B IRC18P47056 224 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B YGL034CP53186 121 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B YNR066CP53752 436 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B IBD2P53892 351 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B BRX1Q08235 291 aaKnown RBP2.44□□□□□ -2.02
YDR261W-BYDR261W-B PCL9Q12477 304 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B YPL119C-AQ3E751 87 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B BI3Q9ZZW7 517 aa2.44□□□□□ -2.02
YDR261W-BYDR261W-B PIS1P06197 220 aaKnown RBP2.43□□□□□ -2.02
YDR261W-BYDR261W-B COS2P0CX12 379 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B COS3P0CX13 379 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B COS4P43542 379 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B NSA1P53136 463 aaPredicted RBP2.43□□□□□ -2.02
YDR261W-BYDR261W-B YML018CQ03730 393 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B ARO80Q04052 950 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B SIR4P11978 1358 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B YHL049CP38722 271 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B YPR098CQ06089 161 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B YLR126CQ12288 251 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B SFM1Q12314 213 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B MRPL20P22354 195 aaPredicted RBP2.43□□□□□ -2.02
YDR261W-BYDR261W-B VPS51P36116 164 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B MED8P38304 223 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B YIA6P40556 373 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B YGL082WP53155 381 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B YML096WQ04489 525 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B DPB2P24482 689 aaPredicted RBP2.43□□□□□ -2.02
YDR261W-BYDR261W-B SPS18P32572 300 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B PRE6P40303 254 aaKnown RBP2.43□□□□□ -2.02
YDR261W-BYDR261W-B GAB1P41733 394 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B PET191Q02772 108 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B HNT3Q08702 217 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B YOR292CQ08743 309 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B PER33Q12144 273 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B ICT1Q12385 394 aa2.43□□□□□ -2.02
YDR261W-BYDR261W-B CTA1P15202 515 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B ERD1P16151 362 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B CDC50P25656 391 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B MOB2P43563 287 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B CPT1P17898 393 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B IFM1P25038 676 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B INO2P26798 304 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B MDM31P38880 579 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B KRE29P40026 464 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B YIL029CP40538 142 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B MRS2Q01926 470 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B FDH1Q08911 376 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B RPS24AP0CX31 135 aaKnown RBP2.42□□□□□ -2.02
YDR261W-BYDR261W-B RPS24BP0CX32 135 aaKnown RBP2.42□□□□□ -2.02
YDR261W-BYDR261W-B CUE1P38428 203 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B NRK1P53915 240 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B TAF9Q05027 157 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B MSA1Q08471 629 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B WTM1Q12363 437 aaKnown RBP2.42□□□□□ -2.02
YDR261W-BYDR261W-B YKR104WP0CE69 306 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B ERD2P18414 219 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B MCK1P21965 375 aaKnown RBP2.42□□□□□ -2.02
YDR261W-BYDR261W-B UBC8P28263 218 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B KTI12P34253 313 aaKnown RBP2.42□□□□□ -2.02
YDR261W-BYDR261W-B FRM2P37261 193 aa2.42□□□□□ -2.02
YDR261W-BYDR261W-B GRE3P38715 327 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
YDR261W-BYDR261W-B EGT2P42835 1041 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 36.6 ms