RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 SLC30A1Q9Y6M5 507 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 TOMM70O94826 608 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 EPHX2P34913 555 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 ZWILCHQ9H900 591 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 TMEM94Q12767 1356 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 CHRNDQ07001 517 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 NOGQ13253 232 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 BTG3Q14201 252 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-205ENST00000623535 TNNI3KQ59H18 835 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 APOA5Q6Q788 366 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 POMGNT2Q8NAT1 580 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 NEK9Q8TD19 979 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 EXT2Q93063 718 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 FAM96AQ9H5X1 160 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 UVRAGQ9P2Y5 699 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 PTPN3P26045 913 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 TRIM71Q2Q1W2 868 aaKnown RBP6.66□□□□□ -1.34
CDKL5-205ENST00000623535 SSH1Q8WYL5 1049 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 PARVGQ9HBI0 331 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 KRT16P08779 473 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 VAMP7P51809 220 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 IKBKEQ14164 716 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 C2CD2LO14523 706 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 BIRC5O15392 142 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 RGS16O15492 202 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-205ENST00000623535 AVILO75366 819 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 PEX5P50542 639 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 UGT3A1Q6NUS8 523 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 JAMLQ86YT9 394 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 CCDC60Q8IWA6 550 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-205ENST00000623535 RASEFQ8IZ41 740 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 U2AF1L4Q8WU68 220 aaKnown RBP6.66□□□□□ -1.34
CDKL5-205ENST00000623535 RIT1Q92963 219 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 KLHL14Q9P2G3 628 aa6.66□□□□□ -1.34
CDKL5-205ENST00000623535 H3BMM5 538 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 HGSO14964 777 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 PQBP1O60828 265 aaKnown RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 IRF1P10914 325 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 KRT4P19013 534 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 VPS33AQ96AX1 596 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 RNF146Q9NTX7 359 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 CFAP43Q8NDM7 1665 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 ADD1P35611 737 aaKnown RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 TMTC3Q6ZXV5 915 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 LRRC43Q8N309 656 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 MLKLQ8NB16 471 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 CATSPERBQ9H7T0 1116 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 RNF14Q9UBS8 474 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 VTI1BQ9UEU0 232 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 TMCC3Q9ULS5 477 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 LUC7L3O95232 432 aaKnown RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 GUCY2CP25092 1073 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 CYP24A1Q07973 514 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 PDE1CQ14123 709 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 GNA13Q14344 377 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 DEPDC7Q96QD5 511 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 CAMKK2Q96RR4 588 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 SYCE1LA8MT33 242 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 GOLGA8SH3BPF8 625 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 DGKZQ13574 1117 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 ZMYND11Q15326 602 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 SHROOM1Q2M3G4 852 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 NAALADL2Q58DX5 795 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 CCDC149Q6ZUS6 474 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 FBXO22Q8NEZ5 403 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 TRIM58Q8NG06 486 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 LPAR1Q92633 364 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 MIR1-1HGQ9H1L0 117 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 ZNF556Q9HAH1 456 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 LATS2Q9NRM7 1088 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 PPIEQ9UNP9 301 aaKnown RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 PHF20L1A8MW92 1017 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 PDE2AO00408 941 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 ERCC1P07992 297 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 SDC4P31431 198 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 EML4Q9HC35 981 aaKnown RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 RXRAP19793 462 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 TRAPPC10P48553 1259 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 ATN1P54259 1190 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-205ENST00000623535 AK8Q96MA6 479 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 TRIM33Q9UPN9 1127 aa6.65□□□□□ -1.34
CDKL5-205ENST00000623535 CALB1P05937 261 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 CASRP41180 1078 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 AARSP49588 968 aaKnown RBP eCLIP6.65□□□□□ -1.35
CDKL5-205ENST00000623535 LIG3P49916 1009 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 BDH1Q02338 343 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 USP41Q3LFD5 358 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 SKAP1Q86WV1 359 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 AHI1Q8N157 1196 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 KCNN2Q9H2S1 579 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 GID8Q9NWU2 228 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 POTEIP0CG38 1075 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 GRK2P25098 689 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 STILQ15468 1287 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 SOHLH2Q9NX45 425 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 COQ6Q9Y2Z9 468 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 TRAPPC8Q9Y2L5 1435 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 HTR1BP28222 390 aa6.65□□□□□ -1.35
CDKL5-205ENST00000623535 RPL21P46778 160 aaKnown RBP6.65□□□□□ -1.35
CDKL5-205ENST00000623535 ADCK5Q3MIX3 580 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms