RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CDKL2Q92772 493 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 AGBL1Q96MI9 1066 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 TTC1Q99614 292 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 TLR10Q9BXR5 811 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 MYO3BQ8WXR4 1341 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 GIPC1O14908 333 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 ZBTB39O15060 712 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 GSTA1P08263 222 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 GSTA2P09210 222 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 ORC2Q13416 577 aaPredicted RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 ZNF667Q5HYK9 610 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 MYCBPAPQ8TBZ2 947 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 RBAKQ9NYW8 714 aaPredicted RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 SHPRHQ149N8 1683 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 MSH4O15457 936 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 ASPHQ12797 758 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 COG2Q14746 738 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 NT5DC1Q5TFE4 455 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 BARGINQ6ZT62 677 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 PRPF38AQ8NAV1 312 aaKnown RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 CCDC124Q96CT7 223 aaKnown RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 RBM15Q96T37 977 aaKnown RBP eCLIP12.81□□□□□ -0.368e-7■■■■□ 19.4
ERBB2-206ENST00000578373 NACA2Q9H009 215 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 ISCUQ9H1K1 167 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 SLC38A10Q9HBR0 1119 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 SEL1LQ9UBV2 794 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 MARCOQ9UEW3 520 aaPredicted RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 TMEM120BA0PK00 339 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 COPEO14579 308 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 DIAPH2O60879 1101 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 PSMC1P62191 440 aaKnown RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 TSEN2Q8NCE0 465 aaKnown RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 NLRP7Q8WX94 980 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 WRNIP1Q96S55 665 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 POP1Q99575 1024 aaKnown RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 POLR3FQ9H1D9 316 aaPredicted RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 MAP3K6O95382 1288 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 COG7P83436 770 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 SNRNP35Q16560 246 aaKnown RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 LRRC43Q8N309 656 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 EPS8L3Q8TE67 593 aaKnown RBP12.81□□□□□ -0.36
ERBB2-206ENST00000578373 ATXN7L3BQ96GX2 97 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 TRIM55Q9BYV6 548 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 MIS12Q9H081 205 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 WNT8AQ9H1J5 351 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 SLC9A2Q9UBY0 812 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 POLLQ9UGP5 575 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 ZFP69BQ9UJL9 534 aa12.81□□□□□ -0.36
ERBB2-206ENST00000578373 GPC4O75487 556 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 ARL4CP56559 192 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 ZNF699Q32M78 642 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 GRAMD1BQ3KR37 738 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 C1orf228Q6PIY5 440 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 RHPN2Q8IUC4 686 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 FBXL16Q8N461 479 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 VGLL2Q8N8G2 317 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 FLAD1Q8NFF5 587 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 OR6B3Q8NGW1 331 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 ATP6V0A4Q9HBG4 840 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 CYP4F11Q9HBI6 524 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 AGO2Q9UKV8 859 aaKnown RBP12.8□□□□□ -0.36
ERBB2-206ENST00000578373 USP20Q9Y2K6 914 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 SCINQ9Y6U3 715 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 RTN2O75298 545 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 PSMC5P62195 406 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 KCNA1Q09470 495 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 BAATQ14032 418 aaPredicted RBP12.8□□□□□ -0.36
ERBB2-206ENST00000578373 SMTNL2Q2TAL5 461 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 P3H1Q32P28 736 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 RHOT1Q8IXI2 618 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 MCPH1Q8NEM0 835 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 SNF8Q96H20 258 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 CBWD1Q9BRT8 395 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 TBC1D22BQ9NU19 505 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 DIS3Q9Y2L1 958 aaKnown RBP12.8□□□□□ -0.36
ERBB2-206ENST00000578373 NUB1Q9Y5A7 615 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 OVOS2A0A0G2JMS6 1433 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 TMEM131LA2VDJ0 1609 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 CAND2O75155 1236 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 GRAP2O75791 330 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 DHX34Q14147 1143 aaKnown RBP12.8□□□□□ -0.36
ERBB2-206ENST00000578373 MMEL1Q495T6 779 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 PIP4K2CQ8TBX8 421 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 PPWD1Q96BP3 646 aaKnown RBP12.8□□□□□ -0.36
ERBB2-206ENST00000578373 PNMA5Q96PV4 448 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 RPF1Q9H9Y2 349 aaKnown RBP12.8□□□□□ -0.36
ERBB2-206ENST00000578373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.8□□□□□ -0.36
ERBB2-206ENST00000578373 TACC3Q9Y6A5 838 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 GOLGA4Q13439 2230 aaKnown RBP12.8□□□□□ -0.36
ERBB2-206ENST00000578373 GMNNO75496 209 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 FAM107AO95990 144 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 ALCAMQ13740 583 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 IL17AQ16552 155 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 LRRC34Q8IZ02 419 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 TTLL6Q8N841 843 aa12.8□□□□□ -0.36
ERBB2-206ENST00000578373 PREX1Q8TCU6 1659 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 RAD23BP54727 409 aa12.79□□□□□ -0.36
ERBB2-206ENST00000578373 PDE1CQ14123 709 aaPredicted RBP12.79□□□□□ -0.36
ERBB2-206ENST00000578373 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms