RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 ACCSQ96QU6 501 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 IKZF4Q9H2S9 585 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 ERVK-5Q9HDB9 667 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 ST3GAL5Q9UNP4 418 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 ZMYM2Q9UBW7 1377 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 A0A1W2PQC6 194 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 EVI5O60447 810 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 PARNO95453 639 aaKnown RBP18.06■□□□□ 0.48
TPM1-219ENST00000559397 PIGRP01833 764 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 CXCL10P02778 98 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 RAG1P15918 1043 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 SFPQP23246 707 aaKnown RBP eCLIP18.06■□□□□ 0.48
TPM1-219ENST00000559397 MARSP56192 900 aaKnown RBP18.06■□□□□ 0.48
TPM1-219ENST00000559397 MIIPQ5JXC2 388 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 CATSPER4Q7RTX7 472 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 VWCEQ96DN2 955 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 TMEM206Q9H813 350 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 TYW1Q9NV66 732 aaKnown RBP18.06■□□□□ 0.48
TPM1-219ENST00000559397 PADI3Q9ULW8 664 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 GPR182O15218 404 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 B4GALT5O43286 388 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 GNA14O95837 355 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 HOXA11P31270 313 aaPredicted RBP18.06■□□□□ 0.48
TPM1-219ENST00000559397 CD52P31358 61 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 MTIF2P46199 727 aaKnown RBP18.06■□□□□ 0.48
TPM1-219ENST00000559397 PRPF4BQ13523 1007 aaKnown RBP18.06■□□□□ 0.48
TPM1-219ENST00000559397 NFIL3Q16649 462 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 MFSD5Q6N075 450 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 CREBRFQ8IUR6 639 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 ACO2Q99798 780 aaKnown RBP18.06■□□□□ 0.48
TPM1-219ENST00000559397 MRPL4Q9BYD3 311 aaKnown RBP18.06■□□□□ 0.48
TPM1-219ENST00000559397 AGPAT5Q9NUQ2 364 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 PCDH10Q9P2E7 1040 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 CNTNAP2Q9UHC6 1331 aa18.06■□□□□ 0.48
TPM1-219ENST00000559397 TET1Q8NFU7 2136 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 TGFB1I1O43294 461 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 ERLIN2O94905 339 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 ARF4P18085 180 aaPredicted RBP18.05■□□□□ 0.48
TPM1-219ENST00000559397 RFC2P35250 354 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 CLCN1P35523 988 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 UBXN1Q04323 297 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 PAK2Q13177 524 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 PLEKHG4Q58EX7 1191 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 SLC39A4Q6P5W5 647 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 DPF3Q92784 378 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 TARS2Q9BW92 718 aaKnown RBP18.05■□□□□ 0.48
TPM1-219ENST00000559397 TMX1Q9H3N1 280 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 EXOC7Q9UPT5 735 aa18.05■□□□□ 0.48
TPM1-219ENST00000559397 LTBP2Q14767 1821 aa18.04■□□□□ 0.48
TPM1-219ENST00000559397 CALUO43852 315 aaPredicted RBP18.04■□□□□ 0.48
TPM1-219ENST00000559397 TPM2P07951 284 aa18.04■□□□□ 0.48
TPM1-219ENST00000559397 PRKCSHP14314 528 aaPredicted RBP18.04■□□□□ 0.48
TPM1-219ENST00000559397 NFX1Q12986 1120 aaKnown RBP18.04■□□□□ 0.48
TPM1-219ENST00000559397 MAN2A1Q16706 1144 aa18.04■□□□□ 0.48
TPM1-219ENST00000559397 ZPBP2Q6X784 338 aa18.04■□□□□ 0.48
TPM1-219ENST00000559397 TC2NQ8N9U0 490 aa18.04■□□□□ 0.48
TPM1-219ENST00000559397 CPB2Q96IY4 423 aa18.04■□□□□ 0.48
TPM1-219ENST00000559397 IFIH1Q9BYX4 1025 aaKnown RBP18.04■□□□□ 0.48
TPM1-219ENST00000559397 PTPRHQ9HD43 1115 aa18.04■□□□□ 0.48
TPM1-219ENST00000559397 PRKAG2Q9UGJ0 569 aa18.04■□□□□ 0.48
TPM1-219ENST00000559397 A0A1B0GUA9 196 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 TISP43B9A030 160 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 ANKRD63C9JTQ0 380 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 ABLIM1O14639 778 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 CETN3O15182 167 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 SKILP12757 684 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 PROZP22891 400 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 AXLP30530 894 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 ADAM9Q13443 819 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 VWA3BQ502W6 1294 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 SYCP3Q8IZU3 236 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 GBP3Q9H0R5 595 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 TNFSF13BQ9Y275 285 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.03■□□□□ 0.481e-6■■■□□ 19.1
TPM1-219ENST00000559397 HNRNPDLO14979 420 aaKnown RBP18.03■□□□□ 0.48
TPM1-219ENST00000559397 TCTN1Q2MV58 587 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 ATF7IP2Q5U623 682 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 CEP135Q66GS9 1140 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 TMEM199Q8N511 208 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 CCDC112Q8NEF3 446 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 BICD1Q96G01 975 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 ZBTB45Q96K62 511 aaPredicted RBP18.03■□□□□ 0.48
TPM1-219ENST00000559397 ERGIC2Q96RQ1 377 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 HAPLN2Q9GZV7 340 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 PDZD7Q9H5P4 517 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 SPTLC3Q9NUV7 552 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 STYXL1Q9Y6J8 313 aa18.03■□□□□ 0.48
TPM1-219ENST00000559397 TOM1L1O75674 476 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 CSF2RAP15509 400 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 SYN1P17600 705 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 NR2F2P24468 414 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 RPL13P26373 211 aaKnown RBP18.02■□□□□ 0.47
TPM1-219ENST00000559397 ADSSP30520 456 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 LIG4P49917 911 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 SNRPFP62306 86 aaKnown RBP18.02■□□□□ 0.47
TPM1-219ENST00000559397 NCBP1Q09161 790 aaKnown RBP18.02■□□□□ 0.47
TPM1-219ENST00000559397 TRIM14Q14142 442 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 DSC3Q14574 896 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 EEF1DP3Q658K8 133 aa18.02■□□□□ 0.47
TPM1-219ENST00000559397 NOTUMQ6P988 496 aa18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms