RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 IL17RAQ96F46 866 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 SAMD11Q96NU1 681 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 INSM2Q96T92 566 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 RIT2Q99578 217 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 CELF4Q9BZC1 486 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 SLKQ9H2G2 1235 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 ABCB6Q9NP58 842 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 FANCLQ9NW38 375 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 SALL4Q9UJQ4 1053 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 PPME1Q9Y570 386 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 CDY2AQ9Y6F7 541 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 MICAL3Q7RTP6 2002 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 KDM3AQ9Y4C1 1321 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 A0A0C4DFX4 3053 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 CHD7Q9P2D1 2997 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 UNC80Q8N2C7 3258 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 CYP3A7-CYP3A51PA0A087WV96 503 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 EPOPA6NHQ4 379 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 EDIL3O43854 480 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 PFKFB2O60825 505 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 FBXO24O75426 580 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 GHRP10912 638 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 XBP1P17861 261 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 CYP3A7P24462 503 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 SLC19A1P41440 591 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 LIG3P49916 1009 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 LMNB2Q03252 620 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 SCRN1Q12765 414 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 POU4F2Q12837 409 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 STK3Q13188 491 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 GRB10Q13322 594 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 CAMK2GQ13555 558 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 Q4G0T1 1027 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 ARSJQ5FYB0 599 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 CCDC181Q5TID7 509 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 FAM117BQ6P1L5 589 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 MOXD1Q6UVY6 613 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 DTHD1Q6ZMT9 781 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 CCDC60Q8IWA6 550 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 TBCKQ8TEA7 893 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 YME1L1Q96TA2 773 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 FTHL17Q9BXU8 183 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 FAM49AQ9H0Q0 323 aaPredicted RBP11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 SUGCTQ9HAC7 445 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 THEGQ9P2T0 379 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 CEP131Q9UPN4 1083 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 TRPV2Q9Y5S1 764 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 MYO9BQ13459 2157 aa11.06□□□□□ -0.64
HNRNPC-228ENST00000557033 WDR64B1ANS9 1081 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 MSH4O15457 936 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 MAGEB2O15479 319 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 LPXNO60711 386 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 UPP2O95045 317 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 SFNP31947 248 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 MRPS5P82675 430 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 AAK1Q2M2I8 961 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 WDR44Q5JSH3 913 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 ODR4Q5SWX8 454 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 MEIOBQ8N635 442 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 GOLM1Q8NBJ4 401 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 TRAPPC12Q8WVT3 735 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 SLC5A5Q92911 643 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 ZBTB10Q96DT7 871 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 FAM167AQ96KS9 214 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 CEP63Q96MT8 703 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 ASB2Q96Q27 587 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 DNAJC7Q99615 494 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 AGO3Q9H9G7 860 aaKnown RBP11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 NRBP2Q9NSY0 501 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 TPCN1Q9ULQ1 816 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 SAMM50Q9Y512 469 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 STK36Q9NRP7 1315 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 IGSF9BQ9UPX0 1349 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 PRUNE2Q8WUY3 3088 aa11.05□□□□□ -0.64
HNRNPC-228ENST00000557033 TRANK1O15050 2925 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 ZBTB42B2RXF5 422 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 GAS7O60861 476 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 JAK3P52333 1124 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 NONOQ15233 471 aaKnown RBP eCLIP11.04□□□□□ -0.648e-7■□□□□ 9.3
HNRNPC-228ENST00000557033 NPY5RQ15761 445 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 LRCH2Q5VUJ6 765 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 KRT25Q7Z3Z0 450 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 KIAA0319LQ8IZA0 1049 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 RDM1Q8NG50 284 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 SNIP1Q8TAD8 396 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 WASF1Q92558 559 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 MBOAT7Q96N66 472 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 UIMC1Q96RL1 719 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 TCF12Q99081 682 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 PHF20Q9BVI0 1012 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 TEKT3Q9BXF9 490 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 LIN7BQ9HAP6 207 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 PRDM6Q9NQX0 595 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 DISC1Q9NRI5 854 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 GABBR1Q9UBS5 961 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 PADI3Q9ULW8 664 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 COG5Q9UP83 839 aa11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 MYH9P35579 1960 aaKnown RBP11.04□□□□□ -0.64
HNRNPC-228ENST00000557033 COL4A6Q14031 1691 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms