RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 PTPRHQ9HD43 1115 aa19.62■□□□□ 0.73
TSFM-208ENST00000543727 TYW1Q9NV66 732 aaKnown RBP19.62■□□□□ 0.73
TSFM-208ENST00000543727 PANK4Q9NVE7 773 aa19.62■□□□□ 0.73
TSFM-208ENST00000543727 MTUS1Q9ULD2 1270 aa19.62■□□□□ 0.73
TSFM-208ENST00000543727 TRIP11Q15643 1979 aa19.62■□□□□ 0.73
TSFM-208ENST00000543727 GOLGA6L4A6NEF3 574 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 EPOPA6NHQ4 379 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 TTLL13PA6NNM8 815 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 MCF2P10911 925 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 IDEP14735 1019 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 KYAT1Q16773 422 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 STXBP4Q6ZWJ1 553 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 ZNF720Q7Z2F6 126 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 MAP4K3Q8IVH8 894 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 COLGALT1Q8NBJ5 622 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 CHAMP1Q96JM3 812 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 MRPL44Q9H9J2 332 aaKnown RBP19.61■□□□□ 0.73
TSFM-208ENST00000543727 TBC1D13Q9NVG8 400 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 STK39Q9UEW8 545 aa19.61■□□□□ 0.73
TSFM-208ENST00000543727 A0A1B0GVL5 298 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 MEIS3P2A8K0S8 358 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 HNRNPDLO14979 420 aaKnown RBP19.6■□□□□ 0.73
TSFM-208ENST00000543727 ACTN4O43707 911 aaKnown RBP19.6■□□□□ 0.73
TSFM-208ENST00000543727 LPXNO60711 386 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 PPP1R37O75864 691 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 RNASELQ05823 741 aaKnown RBP19.6■□□□□ 0.73
TSFM-208ENST00000543727 GPM6BQ13491 265 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 NOLC1Q14978 699 aaKnown RBP eCLIP19.6■□□□□ 0.73
TSFM-208ENST00000543727 HERC4Q5GLZ8 1057 aaPredicted RBP19.6■□□□□ 0.73
TSFM-208ENST00000543727 LRRC55Q6ZSA7 311 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 SPRED2Q7Z698 418 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 CDR2LQ86X02 465 aaPredicted RBP19.6■□□□□ 0.73
TSFM-208ENST00000543727 BICD1Q96G01 975 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 ZNF558Q96NG5 402 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 TMEM175Q9BSA9 504 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 TARS2Q9BW92 718 aaKnown RBP19.6■□□□□ 0.73
TSFM-208ENST00000543727 TOPORSQ9NS56 1045 aaPredicted RBP19.6■□□□□ 0.73
TSFM-208ENST00000543727 EXOC7Q9UPT5 735 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 LZTS1Q9Y250 596 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 HES2Q9Y543 173 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 PCDHB13Q9Y5F0 798 aa19.6■□□□□ 0.73
TSFM-208ENST00000543727 PVALEFA0A1B0GWK0 134 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 ARL5CA6NH57 179 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 ABLIM1O14639 778 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 CLDN3O15551 220 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 GRM5P41594 1212 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 ALDH7A1P49419 539 aaKnown RBP19.59■□□□□ 0.73
TSFM-208ENST00000543727 LIG4P49917 911 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 NDUFA8P51970 172 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 ASIC1P78348 528 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 MCL1Q07820 350 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 GRIK3Q13003 919 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 COASYQ13057 564 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 EEF1DP3Q658K8 133 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 KCNT2Q6UVM3 1135 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 UNC13DQ70J99 1090 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 FSIP1Q8NA03 581 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 GDPD5Q8WTR4 605 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 MRPL38Q96DV4 380 aaKnown RBP19.59■□□□□ 0.73
TSFM-208ENST00000543727 RPS6KC1Q96S38 1066 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 TCHPQ9BT92 498 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 CCDC94Q9BW85 323 aaPredicted RBP19.59■□□□□ 0.73
TSFM-208ENST00000543727 STRA6Q9BX79 667 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 CDT1Q9H211 546 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 GDPD2Q9HCC8 539 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 INPP5FQ9Y2H2 1132 aa19.59■□□□□ 0.73
TSFM-208ENST00000543727 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.59■□□□□ 0.73
TSFM-208ENST00000543727 RECQL4O94761 1208 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 NMT1P30419 496 aaKnown RBP19.58■□□□□ 0.72
TSFM-208ENST00000543727 MLH1P40692 756 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 PLCB3Q01970 1234 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 ADGRE1Q14246 886 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 TIGD5Q53EQ6 642 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 SLFN12LQ6IEE8 588 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 KANK3Q6NY19 840 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 FAM193BQ96PV7 902 aaPredicted RBP19.58■□□□□ 0.72
TSFM-208ENST00000543727 GAD1Q99259 594 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 RNF39Q9H2S5 420 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 SERTAD1Q9UHV2 236 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 PLAGL2Q9UPG8 496 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 MTCH2Q9Y6C9 303 aa19.58■□□□□ 0.72
TSFM-208ENST00000543727 UBE4BO95155 1302 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 EIF3DO15371 548 aaKnown RBP eCLIP19.57■□□□□ 0.72
TSFM-208ENST00000543727 NR1I2O75469 434 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 GCNT3O95395 438 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 IGFBP4P22692 258 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 YARSP54577 528 aaKnown RBP19.57■□□□□ 0.72
TSFM-208ENST00000543727 KRT17Q04695 432 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 LONRF3Q496Y0 759 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 L1TD1Q5T7N2 865 aaKnown RBP19.57■□□□□ 0.72
TSFM-208ENST00000543727 PDE12Q6L8Q7 609 aaKnown RBP19.57■□□□□ 0.72
TSFM-208ENST00000543727 THNSL1Q8IYQ7 743 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 KLHL23Q8NBE8 558 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 STAMQ92783 540 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 ACCSQ96QU6 501 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 APOL6Q9BWW8 343 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 TMEM206Q9H813 350 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 SPG21Q9NZD8 308 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 ANKFY1Q9P2R3 1169 aa19.57■□□□□ 0.72
TSFM-208ENST00000543727 PARP2Q9UGN5 583 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms