RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 NUMBLQ9Y6R0 609 aa7.48□□□□□ -1.21
CCDC7-209ENST00000539197 UNC119BA6NIH7 251 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 DIRC3C9JPN6 131 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 PRAMEF4O60810 478 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 MRPS21P82921 87 aaKnown RBP7.47□□□□□ -1.21
CCDC7-209ENST00000539197 APBA1Q02410 837 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 CCDC62Q6P9F0 684 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 HOMER1Q86YM7 354 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 NIM1KQ8IY84 436 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 MDM1Q8TC05 714 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 RSAD2Q8WXG1 361 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 CEP95Q96GE4 821 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 WNT8AQ9H1J5 351 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.47□□□□□ -1.21
CCDC7-209ENST00000539197 DKK2Q9UBU2 259 aa7.47□□□□□ -1.21
CCDC7-209ENST00000539197 KIAA0355O15063 1070 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 KDM1AO60341 852 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 LPLP06858 475 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 LTA4HP09960 611 aaKnown RBP7.46□□□□□ -1.22
CCDC7-209ENST00000539197 ZSCAN20P17040 1043 aaPredicted RBP7.46□□□□□ -1.22
CCDC7-209ENST00000539197 AVPR1BP47901 424 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 CLK3P49761 638 aaKnown RBP7.46□□□□□ -1.22
CCDC7-209ENST00000539197 IL2P60568 153 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 PDCD4Q53EL6 469 aaKnown RBP7.46□□□□□ -1.22
CCDC7-209ENST00000539197 PITRM1Q5JRX3 1037 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 BROXQ5VW32 411 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 DRICH1Q6PGQ1 229 aaPredicted RBP7.46□□□□□ -1.22
CCDC7-209ENST00000539197 C16orf86Q6ZW13 317 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 ADGRG3Q86Y34 549 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 PLXDC1Q8IUK5 500 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 OR10H5Q8NGA6 315 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 CDC5LQ99459 802 aaKnown RBP7.46□□□□□ -1.22
CCDC7-209ENST00000539197 PRDM13Q9H4Q3 707 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 KCNG1Q9UIX4 513 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 MAP3K2Q9Y2U5 619 aa7.46□□□□□ -1.22
CCDC7-209ENST00000539197 FKBP9O95302 570 aa7.45□□□□□ -1.22
CCDC7-209ENST00000539197 SCNN1BP51168 640 aa7.45□□□□□ -1.22
CCDC7-209ENST00000539197 BEAN1Q3B7T3 259 aa7.45□□□□□ -1.22
CCDC7-209ENST00000539197 FRMD7Q6ZUT3 714 aa7.45□□□□□ -1.22
CCDC7-209ENST00000539197 FKBP9P1Q75LS8 142 aa7.45□□□□□ -1.22
CCDC7-209ENST00000539197 CMTR2Q8IYT2 770 aaKnown RBP7.45□□□□□ -1.22
CCDC7-209ENST00000539197 BBC3Q96PG8 261 aaPredicted RBP7.45□□□□□ -1.22
CCDC7-209ENST00000539197 B5MCH6 92 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 MASP2O00187 686 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 ITGA10O75578 1167 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 MGAT1P26572 445 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 BMPR1AP36894 532 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 LSSP48449 732 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 CT83Q5H943 113 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 CPEB3Q8NE35 698 aaKnown RBP7.44□□□□□ -1.22
CCDC7-209ENST00000539197 APPBP2Q92624 585 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 NEU1Q99519 415 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 EMC7Q9NPA0 242 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 SYBUQ9NX95 663 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 POGKQ9P215 609 aa7.44□□□□□ -1.22
CCDC7-209ENST00000539197 WNT10BO00744 389 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 ADCY6O43306 1168 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 HLA-DOAP06340 250 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 SPATA31D3P0C874 917 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 RBP3P10745 1247 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 LMO1P25800 156 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 PLA2G5P39877 138 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 MEF2AQ02078 507 aaPredicted RBP7.43□□□□□ -1.22
CCDC7-209ENST00000539197 PDCD1Q15116 288 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 C19orf54Q5BKX5 351 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 DALRD3Q5D0E6 543 aaKnown RBP7.43□□□□□ -1.22
CCDC7-209ENST00000539197 METRNLQ641Q3 311 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 EFCAB12Q6NXP0 572 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 SPATA31D4Q6ZUB0 917 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 C11orf74Q86VG3 221 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 AHI1Q8N157 1196 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 PPM1KQ8N3J5 372 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 OR14C36Q8NHC7 312 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 CAVIN3Q969G5 261 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 COQ10AQ96MF6 247 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 ADAM2Q99965 735 aa7.43□□□□□ -1.22
CCDC7-209ENST00000539197 EPN1Q9Y6I3 576 aaPredicted RBP7.43□□□□□ -1.22
CCDC7-209ENST00000539197 RAB11FIP3O75154 756 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 LGALS4P56470 323 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 GUCY1B3Q02153 619 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 HNRNPA0Q13151 305 aaKnown RBP7.42□□□□□ -1.22
CCDC7-209ENST00000539197 TP53BP2Q13625 1128 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 DDB1Q16531 1140 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 MFSD14BQ5SR56 506 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 SYCE2Q6PIF2 218 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 OR2W6PQ8NHA6 318 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 SNX33Q8WV41 574 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 KCTD10Q9H3F6 313 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 CDY2AQ9Y6F7 541 aa7.42□□□□□ -1.22
CCDC7-209ENST00000539197 TBKBP1A7MCY6 615 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 HKR1P10072 659 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 CTSSP25774 331 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 PTH2RP49190 550 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 FOXI1Q12951 378 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 PRAMEF14Q5SWL7 426 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 REPS2Q8NFH8 660 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 SLC35B2Q8TB61 432 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 TFAP2CQ92754 450 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 SLC5A5Q92911 643 aa7.41□□□□□ -1.22
CCDC7-209ENST00000539197 GPRC5DQ9NZD1 345 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms