RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 CNNM4Q6P4Q7 775 aa7□□□□□ -1.29
SDC2-208ENST00000523877 CCDC149Q6ZUS6 474 aa7□□□□□ -1.29
SDC2-208ENST00000523877 HS2ST1Q7LGA3 356 aa7□□□□□ -1.29
SDC2-208ENST00000523877 KRT27Q7Z3Y8 459 aa7□□□□□ -1.29
SDC2-208ENST00000523877 AKAP14Q86UN6 197 aa7□□□□□ -1.29
SDC2-208ENST00000523877 FAM124AQ86V42 546 aa7□□□□□ -1.29
SDC2-208ENST00000523877 NOSTRINQ8IVI9 506 aa7□□□□□ -1.29
SDC2-208ENST00000523877 UNC45BQ8IWX7 931 aa7□□□□□ -1.29
SDC2-208ENST00000523877 CADM3Q8N126 398 aa7□□□□□ -1.29
SDC2-208ENST00000523877 TTC13Q8NBP0 860 aa7□□□□□ -1.29
SDC2-208ENST00000523877 EXOC6Q8TAG9 804 aa7□□□□□ -1.29
SDC2-208ENST00000523877 PRR7Q8TB68 274 aa7□□□□□ -1.29
SDC2-208ENST00000523877 SLC26A7Q8TE54 656 aa7□□□□□ -1.29
SDC2-208ENST00000523877 SLC9A6Q92581 669 aa7□□□□□ -1.29
SDC2-208ENST00000523877 SEPT8Q92599 483 aa7□□□□□ -1.29
SDC2-208ENST00000523877 ZNF516Q92618 1163 aa7□□□□□ -1.29
SDC2-208ENST00000523877 SLC47A1Q96FL8 570 aa7□□□□□ -1.29
SDC2-208ENST00000523877 FERD3LQ96RJ6 166 aa7□□□□□ -1.29
SDC2-208ENST00000523877 CAAP1Q9H8G2 361 aa7□□□□□ -1.29
SDC2-208ENST00000523877 ZNF408Q9H9D4 720 aa7□□□□□ -1.29
SDC2-208ENST00000523877 TM9SF3Q9HD45 589 aa7□□□□□ -1.29
SDC2-208ENST00000523877 ST7Q9NRC1 585 aa7□□□□□ -1.29
SDC2-208ENST00000523877 DACT1Q9NYF0 836 aa7□□□□□ -1.29
SDC2-208ENST00000523877 CABP1Q9NZU7 370 aa7□□□□□ -1.29
SDC2-208ENST00000523877 NDUFA13Q9P0J0 144 aa7□□□□□ -1.29
SDC2-208ENST00000523877 REV1Q9UBZ9 1251 aa7□□□□□ -1.29
SDC2-208ENST00000523877 PCDHB6Q9Y5E3 794 aa7□□□□□ -1.29
SDC2-208ENST00000523877 PPRC1Q5VV67 1664 aaKnown RBP7□□□□□ -1.29
SDC2-208ENST00000523877 SLC12A8A0AV02 714 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 FRMD3A2A2Y4 597 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 SNTNA6NMZ2 147 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 MEN1O00255 615 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 NRG2O14511 850 aaPredicted RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 FRS3O43559 492 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 TLR5O60602 858 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 RFPL1O75677 317 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 KLHL18O94889 574 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 SLU7O95391 586 aaKnown RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 ALBP02768 609 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 RETP07949 1114 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 GNAT1P11488 350 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 CYP2A6P11509 494 aaPredicted RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 GAP43P17677 238 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 CDC25CP30307 473 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 ALDH3A1P30838 453 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 SOX5P35711 763 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 NPTX2P47972 431 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 ACADVLP49748 655 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 HDGFP51858 240 aaKnown RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 MYL6P60660 151 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 RNASELQ05823 741 aaKnown RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 SQSTM1Q13501 440 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 RAB33AQ14088 237 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 NCF4Q15080 339 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 ZNF124Q15973 351 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 LRIT3Q3SXY7 679 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 CFAP100Q494V2 611 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 AARDQ4LEZ3 155 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 ZNF658Q5TYW1 1059 aaPredicted RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 TBC1D9BQ66K14 1250 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 SIGIRRQ6IA17 410 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 XRRA1Q6P2D8 792 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 TMEM154Q6P9G4 183 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 KRT74Q7RTS7 529 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 DNAJB7Q7Z6W7 309 aaPredicted RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 ZBTB46Q86UZ6 589 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 KRT73Q86Y46 540 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 NUP93Q8N1F7 819 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 ZBTB44Q8NCP5 570 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 EHBP1Q8NDI1 1231 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 CALML6Q8TD86 181 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 CPLX3Q8WVH0 158 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 MAIP1Q8WWC4 291 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 ATL1Q8WXF7 558 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 BSNDQ8WZ55 320 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 IRGQQ8WZA9 623 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 HSPH1Q92598 858 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 RUBCNQ92622 972 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 CCDC43Q96MW1 224 aaKnown RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 CHCHD6Q9BRQ6 235 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 TMUB1Q9BVT8 246 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 GCOM2Q9BZD3 368 aaPredicted RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 NDEL1Q9GZM8 345 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 IFT22Q9H7X7 185 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 FBRSQ9HAH7 460 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 PDE11AQ9HCR9 933 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 WDR6Q9NNW5 1121 aaKnown RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 SH2B1Q9NRF2 756 aaPredicted RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 C1orf112Q9NSG2 853 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 KLHL11Q9NVR0 708 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 FNIP2Q9P278 1114 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 SRP68Q9UHB9 627 aaKnown RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 PLAAQ9Y263 795 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 RRBP1Q9P2E9 1410 aaKnown RBP6.99□□□□□ -1.29
SDC2-208ENST00000523877 PBRM1Q86U86 1689 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 WDR19Q8NEZ3 1342 aa6.99□□□□□ -1.29
SDC2-208ENST00000523877 ADCY10Q96PN6 1610 aa6.98□□□□□ -1.29
SDC2-208ENST00000523877 GOLGA8QA0A0J9YX86 632 aa6.98□□□□□ -1.29
SDC2-208ENST00000523877 CTAGE15A4D2H0 777 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms