RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, human

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-216	ENST00000509784	TTC7B	Q86TV6	843 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZDHHC14	Q8IZN3	488 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	KLHL36	Q8N4N3	616 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	FAM156A	Q8NDB6	213 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	FBXO18	Q8NFZ0	1043 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PJA1	Q8NG27	643 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	OR14K1	Q8NGZ2	314 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ADAMTS17	Q8TE56	1095 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NSUN6	Q8TEA1	469 aa	Known RBP	3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZNF480	Q8WV37	535 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	STON2	Q8WXE9	905 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PMM1	Q92871	262 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	DACT3	Q96B18	629 aa	Predicted RBP	3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RGMA	Q96B86	450 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CLPTM1L	Q96KA5	538 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PPP1R16B	Q96T49	567 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PDCD2L	Q9BRP1	358 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	LRFN3	Q9BTN0	628 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	B3GNT5	Q9BYG0	378 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	OR10A2	Q9H208	303 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MANSC1	Q9H8J5	431 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	C14orf93	Q9H972	538 aa	Known RBP	3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CD320	Q9NPF0	282 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	USP25	Q9UHP3	1055 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ADAM29	Q9UKF5	820 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SIK3	Q9Y2K2	1263 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NR2E3	Q9Y5X4	410 aa		3.96	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ERICH3	Q5RHP9	1530 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	BIVM-ERCC5	R4GMW8	1640 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NPIPB6	E9PJ23	425 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	FAM227A	F5H4B4	570 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ADCY6	O43306	1168 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SGTA	O43765	313 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ITGA10	O75578	1167 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TOX4	O94842	621 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZBED1	O96006	694 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SREBF1	P36956	1147 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	WNT3A	P56704	352 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	BPIFB4	P59827	614 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CDC42EP1	Q00587	391 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CAP1	Q01518	475 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	DUSP2	Q05923	314 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TARDBP	Q13148	414 aa	Known RBP eCLIP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	BIRC2	Q13490	618 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PICALM	Q13492	652 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TBR1	Q16650	682 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZNF827	Q17R98	1081 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	KIAA0753	Q2KHM9	967 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	KHDC1	Q4VXA5	237 aa	Known RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZMAT1	Q5H9K5	638 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	FAM26F	Q5R3K3	315 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	GJC2	Q5T442	439 aa	Predicted RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	THEMIS2	Q5TEJ8	643 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	KRT40	Q6A162	431 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	CYB5RL	Q6IPT4	315 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RALYL	Q86SE5	291 aa	Known RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	DAAM2	Q86T65	1068 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RSPH3	Q86UC2	560 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ANKRD53	Q8N9V6	530 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	REPS2	Q8NFH8	660 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	OR7D4	Q8NG98	312 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	KLHDC4	Q8TBB5	520 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TMX3	Q96JJ7	454 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	LCOR	Q96JN0	433 aa	Predicted RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RPL10L	Q96L21	214 aa	Known RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RPS6KC1	Q96S38	1066 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MPHOSPH6	Q99547	160 aa	Known RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	POLR3GL	Q9BT43	218 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SENP6	Q9GZR1	1112 aa	Predicted RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TMEM60	Q9H2L4	133 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ARMT1	Q9H993	441 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	BCO1	Q9HAY6	547 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	DDX21	Q9NR30	783 aa	Known RBP eCLIP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	GPRC5D	Q9NZD1	345 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NCDN	Q9UBB6	729 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	TRPS1	Q9UHF7	1281 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	STXBP5L	Q9Y2K9	1186 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PCDHGB6	Q9Y5F9	930 aa		3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	MYBBP1A	Q9BQG0	1328 aa	Known RBP	3.95	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ARAP1	Q96P48	1450 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	DHX57	Q6P158	1386 aa	Known RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PMM2	O15305	246 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	SLC16A6	O15403	523 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	AMY1A	P04745	511 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	IFIT2	P09913	472 aa	Known RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	VSIG10L2	P0DP72	767 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	GYPE	P15421	78 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	PTPN7	P35236	360 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	RAP1GAP	P47736	663 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ADCY7	P51828	1080 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	NOG	Q13253	232 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	OS9	Q13438	667 aa	Predicted RBP	3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	BRD3	Q15059	726 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	KCNA10	Q16322	511 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ANO6	Q4KMQ2	910 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	GADL1	Q6ZQY3	521 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	HEATR3	Q7Z4Q2	680 aa		3.94	□□□□□ -1.78
CALCOCO2-216	ENST00000509784	ZNF761	Q86XN6	746 aa	Predicted RBP	3.94	□□□□□ -1.78

Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms