RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 KCNJ6P48051 423 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 NLRP11P59045 1033 aaKnown RBP13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 ADAM17P78536 824 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 CDC42EP1Q00587 391 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 ENPEPQ07075 957 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 CETN1Q12798 172 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 FAM187BQ17R55 369 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 COL13A1Q5TAT6 717 aaPredicted RBP13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 ATF7IP2Q5U623 682 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 MPZL3Q6UWV2 235 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 RUFY4Q6ZNE9 571 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 TSHZ1Q6ZSZ6 1077 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 C17orf53Q8N3J3 647 aaPredicted RBP13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 PLEKHO2Q8TD55 490 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 PARD3BQ8TEW8 1205 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 CCDC127Q96BQ5 260 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 MFSD14AQ96MC6 490 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 TCHPQ9BT92 498 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 HAPLN2Q9GZV7 340 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 PLCB1Q9NQ66 1216 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 ZNHIT6Q9NWK9 470 aaKnown RBP13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 SIP14410 1827 aa13.7□□□□□ -0.22
LYSMD3-204ENST00000509384 P4HA2O15460 535 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 TREHO43280 583 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 B4GALT5O43286 388 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 ACTN1P12814 892 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 SLC9A1P19634 815 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 PON1P27169 355 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 CST5P28325 142 aaPredicted RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 HOXC8P31273 242 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 ACOT2P49753 483 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 MXI1P50539 228 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 POLR2FP61218 127 aaKnown RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 MCL1Q07820 350 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 HIC1Q14526 733 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 KIZQ2M2Z5 673 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 C1orf220Q5T0J3 134 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 CYP26C1Q6V0L0 522 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 ZBTB33Q86T24 672 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 KLHDC9Q8NEP7 349 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 INTS2Q9H0H0 1204 aaKnown RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 GANQ9H2C0 597 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 RBAKQ9NYW8 714 aaPredicted RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 TSKSQ9UJT2 592 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 TRIM17Q9Y577 477 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 CNTNAP2Q9UHC6 1331 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 LRRIQ3A6PVS8 624 aaPredicted RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 OGTO15294 1046 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 CSDE1O75534 798 aaKnown RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 NOL4O94818 638 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 ERLIN2O94905 339 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 ASGR1P07306 291 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 DLATP10515 647 aaKnown RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 PROZP22891 400 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 GRK4P32298 578 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 GCLMP48507 274 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 MCCD1P59942 119 aaPredicted RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 ZNF200P98182 395 aaPredicted RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 APBA1Q02410 837 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 PPP3CAQ08209 521 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 PSMD6Q15008 389 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 KCNA10Q16322 511 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 MEA1Q16626 185 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 AMHR2Q16671 573 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 NBPF20Q3BBV1 942 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 DNTTIP2Q5QJE6 756 aaKnown RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 KLHDC7AQ5VTJ3 777 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 RRAGAQ7L523 313 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 RNF180Q86T96 592 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 TMTC1Q8IUR5 882 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 PCSK9Q8NBP7 692 aaKnown RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 DNAJB3Q8WWF6 145 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 BAP1Q92560 729 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 FNBP1Q96RU3 617 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 GCOM2Q9BZD3 368 aaPredicted RBP13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 ADAMTS10Q9H324 1103 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 GINS2Q9Y248 185 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
LYSMD3-204ENST00000509384 SOWAHDA6NJG2 315 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 LRRC53A6NM62 1247 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 ABLIM1O14639 778 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 PMM2O15305 246 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 GPR32O75388 356 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 IQCF3P0C7M6 154 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 UCHL3P15374 230 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 GTF2H1P32780 548 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 TMEM62Q0P6H9 643 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 FAM47CQ5HY64 1035 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 ZBTB41Q5SVQ8 909 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 TAF2Q6P1X5 1199 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 PDXDC1Q6P996 788 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 TRIM65Q6PJ69 517 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 CRELD2Q6UXH1 353 aaPredicted RBP13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 TMEM117Q9H0C3 514 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 NUCKS1Q9H1E3 243 aaKnown RBP13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 TMEM8AQ9HCN3 771 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 PTPRHQ9HD43 1115 aa13.68□□□□□ -0.22
LYSMD3-204ENST00000509384 HMX1Q9NP08 348 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms