RNA–Protein interactions for RNA: ENST00000497171.1

PHC3-216, Transcript of polyhomeotic homolog 3, humanhuman

TSL 2

Gene PHC3, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-216ENST00000497171 PCIF1Q9H4Z3 704 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 CABP5Q9NP86 173 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 MCM8Q9UJA3 840 aa4.53□□□□□ -1.68
PHC3-216ENST00000497171 PIPSLA2A3N6 862 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 PRR5-ARHGAP8B1AHC4 643 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 GLRX3O76003 335 aaKnown RBP4.52□□□□□ -1.69
PHC3-216ENST00000497171 KRT37O76014 449 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 VIL1P09327 827 aaKnown RBP4.52□□□□□ -1.69
PHC3-216ENST00000497171 CPEP16870 476 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 PTH2RP49190 550 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 SCNN1BP51168 640 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 WNT3AP56704 352 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 EVA1CP58658 441 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 FAM189BP81408 668 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 FAM50AQ14320 339 aaKnown RBP4.52□□□□□ -1.69
PHC3-216ENST00000497171 STRA8Q7Z7C7 330 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 SRRM1Q8IYB3 904 aaKnown RBP4.52□□□□□ -1.69
PHC3-216ENST00000497171 NXPE1Q8N323 547 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 LILRA3Q8N6C8 439 aaPredicted RBP4.52□□□□□ -1.69
PHC3-216ENST00000497171 USP7Q93009 1102 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 ACSS2Q9NR19 701 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 ZKSCAN5Q9Y2L8 839 aa4.52□□□□□ -1.69
PHC3-216ENST00000497171 ZNF185O15231 689 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 GAS7O60861 476 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 ESRRBO95718 433 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 KCNA6P17658 529 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 DDX6P26196 483 aaKnown RBP eCLIP4.51□□□□□ -1.69
PHC3-216ENST00000497171 ABCG1P45844 678 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 KIF11P52732 1056 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 IL2P60568 153 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 SEPT7Q16181 437 aaKnown RBP4.51□□□□□ -1.69
PHC3-216ENST00000497171 ARHGAP44Q17R89 818 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 BEAN1Q3B7T3 259 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 DOK3Q7L591 496 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 DDX42Q86XP3 938 aaKnown RBP eCLIP4.51□□□□□ -1.69
PHC3-216ENST00000497171 CPEB3Q8NE35 698 aaKnown RBP4.51□□□□□ -1.69
PHC3-216ENST00000497171 OR2W6PQ8NHA6 318 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 IL17RAQ96F46 866 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 GPR101Q96P66 508 aaPredicted RBP4.51□□□□□ -1.69
PHC3-216ENST00000497171 OSBPL6Q9BZF3 934 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 BRINP2Q9C0B6 783 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 MTFR1LQ9H019 292 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 RNF181Q9P0P0 153 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 ATP8A1Q9Y2Q0 1164 aa4.51□□□□□ -1.69
PHC3-216ENST00000497171 FAM83GA6ND36 823 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 ZNF891A8MT65 544 aaPredicted RBP4.5□□□□□ -1.69
PHC3-216ENST00000497171 ZFPL1O95159 310 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 HOXB6P17509 224 aaKnown RBP4.5□□□□□ -1.69
PHC3-216ENST00000497171 CDK11BP21127 795 aaKnown RBP4.5□□□□□ -1.69
PHC3-216ENST00000497171 CDKN1CP49918 316 aaPredicted RBP4.5□□□□□ -1.69
PHC3-216ENST00000497171 FOXI1Q12951 378 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 TMEM177Q53S58 311 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 ARMC6Q6NXE6 501 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 OVCH1Q7RTY7 1134 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 ZNF366Q8N895 744 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 PRPF38AQ8NAV1 312 aaKnown RBP4.5□□□□□ -1.69
PHC3-216ENST00000497171 TTC1Q99614 292 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 CPEB1Q9BZB8 566 aaKnown RBP4.5□□□□□ -1.69
PHC3-216ENST00000497171 HAPLN2Q9GZV7 340 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 HOMER2Q9NSB8 354 aa4.5□□□□□ -1.69
PHC3-216ENST00000497171 PTPDC1A2A3K4 754 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 DNAJC9-AS1A6NH13 148 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 UNC119BA6NIH7 251 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 IGLV2-14P01704 120 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 POU3F2P20265 443 aaPredicted RBP4.49□□□□□ -1.69
PHC3-216ENST00000497171 PLA2G5P39877 138 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 TMPRSS15P98073 1019 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 NHLH1Q02575 133 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 TIGD7Q6NT04 549 aaPredicted RBP4.49□□□□□ -1.69
PHC3-216ENST00000497171 SLC44A3Q8N4M1 653 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 AFAP1L2Q8N4X5 818 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 FAM98AQ8NCA5 519 aaKnown RBP4.49□□□□□ -1.69
PHC3-216ENST00000497171 CHST14Q8NCH0 376 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 WDR66Q8TBY9 1149 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 ZNF384Q8TF68 577 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 HIST1H2AHQ96KK5 128 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 HIST1H2AJQ99878 128 aa4.49□□□□□ -1.69
PHC3-216ENST00000497171 THG1LQ9NWX6 298 aaKnown RBP4.49□□□□□ -1.69
PHC3-216ENST00000497171 USP36Q9P275 1121 aaKnown RBP4.49□□□□□ -1.69
PHC3-216ENST00000497171 CBX4O00257 560 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 RAB11FIP3O75154 756 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 ALDH1A2O94788 518 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 CYP17A1P05093 508 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 MGAT1P26572 445 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 ID4P47928 161 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 ZNF81P51508 661 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 KPNA1P52294 538 aaPredicted RBP4.48□□□□□ -1.69
PHC3-216ENST00000497171 RNASE9P60153 205 aaKnown RBP4.48□□□□□ -1.69
PHC3-216ENST00000497171 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
PHC3-216ENST00000497171 FOXF2Q12947 444 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 DHCR24Q15392 516 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 C11orf74Q86VG3 221 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 IFT22Q9H7X7 185 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 SPON1Q9HCB6 807 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 KMT5AQ9NQR1 393 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 CHST2Q9Y4C5 530 aa4.48□□□□□ -1.69
PHC3-216ENST00000497171 ARHGEF17Q96PE2 2063 aaPredicted RBP4.47□□□□□ -1.69
PHC3-216ENST00000497171 H7C1D1 291 aa4.47□□□□□ -1.69
PHC3-216ENST00000497171 NEMP1O14524 444 aa4.47□□□□□ -1.69
PHC3-216ENST00000497171 BRINP1O60477 761 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms