RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 DAW1Q8N136 415 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 TMEM87AQ8NBN3 555 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 GSTCDQ8NEC7 633 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 FEZF2Q8TBJ5 459 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 KIFAP3Q92845 792 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 TMEM175Q9BSA9 504 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 C11orf16Q9NQ32 467 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 SNTG2Q9NY99 539 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 GIT1Q9Y2X7 761 aa15.47■□□□□ 0.07
VTI1A-206ENST00000489142 SFI1A8K8P3 1242 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 PI4K2BG5E9Z4 385 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 N4BP3O15049 544 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 INPPL1O15357 1258 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 WEE2P0C1S8 567 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 EPCAMP16422 314 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 COL9A1P20849 921 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 GRIN1Q05586 938 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 DSC1Q08554 894 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 CUL4AQ13619 759 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 BMS1Q14692 1282 aaKnown RBP15.46■□□□□ 0.07
VTI1A-206ENST00000489142 NT5DC1Q5TFE4 455 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 RINT1Q6NUQ1 792 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 TMEM184AQ6ZMB5 413 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 C12orf76Q8N812 135 aaPredicted RBP15.46■□□□□ 0.07
VTI1A-206ENST00000489142 B3GALT6Q96L58 329 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 C1QTNF1Q9BXJ1 281 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 S1PR5Q9H228 398 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 MUTYHQ9UIF7 546 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 GDAQ9Y2T3 454 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 STK24Q9Y6E0 443 aa15.46■□□□□ 0.07
VTI1A-206ENST00000489142 NPHP3-ACAD11A0A0J9YXS1 232 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 FSD2A1L4K1 749 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 ACKR2O00590 384 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 RECQL4O94761 1208 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 NPTX2P47972 431 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 CACNB1Q02641 598 aaPredicted RBP15.45■□□□□ 0.06
VTI1A-206ENST00000489142 MAPK7Q13164 816 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 RARS2Q5T160 578 aaKnown RBP15.45■□□□□ 0.06
VTI1A-206ENST00000489142 C1orf186Q6ZWK4 172 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 SUSD6Q92537 303 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 CASP10Q92851 521 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 RPGRIP1Q96KN7 1286 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 RPS6KC1Q96S38 1066 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 POP1Q99575 1024 aaKnown RBP15.45■□□□□ 0.06
VTI1A-206ENST00000489142 PAAF1Q9BRP4 392 aa15.45■□□□□ 0.06
VTI1A-206ENST00000489142 CASTOR2A6NHX0 329 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 SLC16A4O15374 487 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 CNPP09543 421 aaKnown RBP15.44■□□□□ 0.06
VTI1A-206ENST00000489142 MYBP10242 640 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 GRIK3Q13003 919 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 SF3A1Q15459 793 aaKnown RBP15.44■□□□□ 0.06
VTI1A-206ENST00000489142 TMEM31Q5JXX7 168 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 ATF7IP2Q5U623 682 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 CABP7Q86V35 215 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 RNF135Q8IUD6 432 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 LRRC15Q8TF66 581 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 HASPINQ8TF76 798 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 CDK5RAP3Q96JB5 506 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 ADPGKQ9BRR6 497 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 LRFN3Q9BTN0 628 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 HERC2P3Q9BVR0 1158 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 C2orf16Q68DN1 1984 aa15.44■□□□□ 0.06
VTI1A-206ENST00000489142 CARNS1A5YM72 827 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 K7ERI5 159 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 PTGESO14684 152 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 DCXO43602 365 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 SOD2P04179 222 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 EFNA5P52803 228 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 DMP1Q13316 513 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-206ENST00000489142 DHX8Q14562 1220 aaKnown RBP15.43■□□□□ 0.06
VTI1A-206ENST00000489142 CBX2Q14781 532 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-206ENST00000489142 TMEM119Q4V9L6 283 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 GLRA4Q5JXX5 417 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 HYIQ5T013 277 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 ARL6IP4Q66PJ3 421 aaKnown RBP15.43■□□□□ 0.06
VTI1A-206ENST00000489142 FAM173BQ6P4H8 233 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 TAS1R3Q7RTX0 852 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 BRAPQ7Z569 592 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 ZBTB33Q86T24 672 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 SLC22A17Q8WUG5 538 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 DRC1Q96MC2 740 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 KLHL5Q96PQ7 755 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 PHF7Q9BWX1 381 aaPredicted RBP15.43■□□□□ 0.06
VTI1A-206ENST00000489142 KMT5AQ9NQR1 393 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 TSHZ2Q9NRE2 1034 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 MRPL17Q9NRX2 175 aaKnown RBP15.43■□□□□ 0.06
VTI1A-206ENST00000489142 IRAK3Q9Y616 596 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 CLIC4Q9Y696 253 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 TRIOO75962 3097 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 MYH15Q9Y2K3 1946 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 PHLPP2Q6ZVD8 1323 aa15.43■□□□□ 0.06
VTI1A-206ENST00000489142 URODP06132 367 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 PLA2G4BP0C869 781 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 KLRC2P26717 231 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 SLC12A3P55017 1021 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 OSTNP61366 133 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 GIT2Q14161 759 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 SPECC1Q5M775 1068 aa15.42■□□□□ 0.06
VTI1A-206ENST00000489142 GLYCTKQ8IVS8 523 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms