RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 SLC11A1P49279 550 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 DLX2Q07687 328 aaPredicted RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 SIGLEC14Q08ET2 396 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 TUSC3Q13454 348 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 MTMR3Q13615 1198 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 LONRF3Q496Y0 759 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 LARP1BQ659C4 914 aaKnown RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 CDCA2Q69YH5 1023 aaPredicted RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 CCDC149Q6ZUS6 474 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 MAEAQ7L5Y9 396 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 OTOP3Q7RTS5 596 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 BRAPQ7Z569 592 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 TDRD5Q8NAT2 981 aaKnown RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 RASSF8Q8NHQ8 419 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 SUSD6Q92537 303 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 NXPE3Q969Y0 559 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 CPB2Q96IY4 423 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 HERC2P3Q9BVR0 1158 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 CCDC94Q9BW85 323 aaPredicted RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 APOL6Q9BWW8 343 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 FZD8Q9H461 694 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 TMEM134Q9H6X4 195 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 XPNPEP1Q9NQW7 623 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 DDX19AQ9NUU7 478 aaKnown RBP8.24□□□□□ -1.09
CPNE1-226ENST00000486021 FNIP2Q9P278 1114 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 ADAM28Q9UKQ2 775 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 KIAA1024Q9UPX6 916 aa8.24□□□□□ -1.09
CPNE1-226ENST00000486021 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.091e-11■■■■■ 108.6
CPNE1-226ENST00000486021 PLXNA3P51805 1871 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 DENND4AQ7Z401 1863 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 MYO7AQ13402 2215 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 MYO10Q9HD67 2058 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 BRWD1Q9NSI6 2320 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 C2orf16Q68DN1 1984 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 FAM205CA6NFA0 338 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 HIDE1A8MVS5 230 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 MED24O75448 989 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 SEC24BO95487 1268 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 SPATA31C1P0DKV0 1188 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 GJB2P29033 226 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 PLA2G5P39877 138 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 TXLNAP40222 546 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 MLH1P40692 756 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 UBA7P41226 1012 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 ZXDAP98168 799 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 KCNC3Q14003 757 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 C8orf34Q49A92 452 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 POTEGQ6S5H5 508 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 COLGALT2Q8IYK4 626 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 ZDHHC14Q8IZN3 488 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 IGSF22Q8N9C0 903 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 ZNF579Q8NAF0 562 aaKnown RBP8.23□□□□□ -1.09
CPNE1-226ENST00000486021 SMG8Q8ND04 991 aaKnown RBP8.23□□□□□ -1.09
CPNE1-226ENST00000486021 VN1R2Q8NFZ6 395 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 ASAP3Q8TDY4 903 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 PBXIP1Q96AQ6 731 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 DDX27Q96GQ7 796 aaKnown RBP8.23□□□□□ -1.09
CPNE1-226ENST00000486021 FBXL18Q96ME1 805 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 TSPAN18Q96SJ8 248 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 GAD1Q99259 594 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 TCHPQ9BT92 498 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 MRPL4Q9BYD3 311 aaKnown RBP8.23□□□□□ -1.09
CPNE1-226ENST00000486021 RHOBTB2Q9BYZ6 727 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 TMEM60Q9H2L4 133 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 BHMT2Q9H2M3 363 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 MINDY3Q9H8M7 445 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 PIDD1Q9HB75 910 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 KMT5AQ9NQR1 393 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 TSHZ2Q9NRE2 1034 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 DNAJB4Q9UDY4 337 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 CCDC39Q9UFE4 941 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 SORCS3Q9UPU3 1222 aa8.23□□□□□ -1.09
CPNE1-226ENST00000486021 ZFP37Q9Y6Q3 630 aaPredicted RBP8.23□□□□□ -1.09
CPNE1-226ENST00000486021 ARHGEF37A1IGU5 675 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 ZBTB39O15060 712 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 DDHD2O94830 711 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 LIG1P18858 919 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 PAX3P23760 479 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 PBX3P40426 434 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 MATR3P43243 847 aaKnown RBP eCLIP8.22□□□□□ -1.09
CPNE1-226ENST00000486021 SCNN1GP51170 649 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 CLCN4P51793 760 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 DSG1Q02413 1049 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 DSC1Q08554 894 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 HSP90AA2PQ14568 343 aaPredicted RBP8.22□□□□□ -1.09
CPNE1-226ENST00000486021 PTPN14Q15678 1187 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 PTPN21Q16825 1174 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 UBXN11Q5T124 520 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 RARS2Q5T160 578 aaKnown RBP8.22□□□□□ -1.09
CPNE1-226ENST00000486021 LIN9Q5TKA1 542 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 ATF7IP2Q5U623 682 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 FUT10Q6P4F1 479 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 TRIM67Q6ZTA4 783 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 ZNF280BQ86YH2 543 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 CMASQ8NFW8 434 aaPredicted RBP8.22□□□□□ -1.09
CPNE1-226ENST00000486021 TMX3Q96JJ7 454 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 KLHL5Q96PQ7 755 aa8.22□□□□□ -1.09
CPNE1-226ENST00000486021 EIF2AQ9BY44 585 aaKnown RBP8.22□□□□□ -1.09
CPNE1-226ENST00000486021 OXCT2Q9BYC2 517 aaPredicted RBP8.22□□□□□ -1.09
CPNE1-226ENST00000486021 S1PR5Q9H228 398 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms