RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 MPEG1Q2M385 716 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 CIAPIN1Q6FI81 312 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 GGT6Q6P531 493 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 HEATR3Q7Z4Q2 680 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 SESTD1Q86VW0 696 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 WFDC3Q8IUB2 231 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 RHOT1Q8IXI2 618 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 PDILTQ8N807 584 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 TRAPPC12Q8WVT3 735 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 FAM167AQ96KS9 214 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 AMNQ9BXJ7 453 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 PDP2Q9P2J9 529 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 FBXO2Q9UK22 296 aaPredicted RBP6.33□□□□□ -1.4
COPA-203ENST00000481040 GJD2Q9UKL4 321 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 CEP83Q9Y592 693 aa6.33□□□□□ -1.4
COPA-203ENST00000481040 SETD1BQ9UPS6 1966 aaKnown RBP6.33□□□□□ -1.4
COPA-203ENST00000481040 CYP26A1O43174 497 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 NRP2O60462 931 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 SKAP2O75563 359 aaPredicted RBP6.32□□□□□ -1.4
COPA-203ENST00000481040 RNASEH2AO75792 299 aaKnown RBP6.32□□□□□ -1.4
COPA-203ENST00000481040 DHRS4L1P0CG22 281 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 BRAFP15056 766 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 SEPT2Q15019 361 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 AOC3Q16853 763 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 ARL13BQ3SXY8 428 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 RALGPS1Q5JS13 557 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 CD276Q5ZPR3 534 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 GLB1L2Q8IW92 636 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 CACNA2D3Q8IZS8 1091 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 OR10H5Q8NGA6 315 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 PAWRQ96IZ0 340 aaKnown RBP6.32□□□□□ -1.4
COPA-203ENST00000481040 CLPTM1LQ96KA5 538 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 HIST1H2AHQ96KK5 128 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 UBXN10Q96LJ8 280 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 DMRTA2Q96SC8 542 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 HIST1H2AJQ99878 128 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 TMEM120AQ9BXJ8 343 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 CARS2Q9HA77 564 aaKnown RBP6.32□□□□□ -1.4
COPA-203ENST00000481040 RXFP1Q9HBX9 757 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 PNPOQ9NVS9 261 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 NUDT5Q9UKK9 219 aa6.32□□□□□ -1.4
COPA-203ENST00000481040 A0A1W2PPC4 97 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 DYTNA2CJ06 578 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 NOTOA8MTQ0 251 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 TIMM44O43615 452 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 ZNF500O60304 480 aaPredicted RBP6.31□□□□□ -1.4
COPA-203ENST00000481040 PLA2G6O60733 806 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 ARIH2O95376 493 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 CNOT4O95628 575 aaKnown RBP6.31□□□□□ -1.4
COPA-203ENST00000481040 TYRP14679 529 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 THBS2P35442 1172 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 ALDH9A1P49189 494 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 NRG3P56975 720 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 CYP4F8P98187 520 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 CDC42EP1Q00587 391 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 PRKCQQ04759 706 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 SLC35G1Q2M3R5 365 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 KHDC1Q4VXA5 237 aaKnown RBP6.31□□□□□ -1.4
COPA-203ENST00000481040 FKBP15Q5T1M5 1219 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 INTS11Q5TA45 600 aaKnown RBP6.31□□□□□ -1.4
COPA-203ENST00000481040 KLHDC7AQ5VTJ3 777 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 LRSAM1Q6UWE0 723 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 FAM180AQ6UWF9 173 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 CBLL1Q75N03 491 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 RSRC2Q7L4I2 434 aaKnown RBP6.31□□□□□ -1.4
COPA-203ENST00000481040 SH2D3CQ8N5H7 860 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 GPR156Q8NFN8 814 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.31□□□□□ -1.4
COPA-203ENST00000481040 PEX11GQ96HA9 241 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 MSLNLQ96KJ4 702 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 SAMD11Q96NU1 681 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 RMDN3Q96TC7 470 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 EPB41L4AQ9HCS5 686 aaPredicted RBP6.31□□□□□ -1.4
COPA-203ENST00000481040 SLC39A2Q9NP94 309 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 JADE2Q9NQC1 790 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 INCENPQ9NQS7 918 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 ITM2CQ9NQX7 267 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 TDP1Q9NUW8 608 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.31□□□□□ -1.4
COPA-203ENST00000481040 SLAMF8Q9P0V8 285 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 CPNE7Q9UBL6 633 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 GRHPRQ9UBQ7 328 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 CPA4Q9UI42 421 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 RNF114Q9Y508 228 aa6.31□□□□□ -1.4
COPA-203ENST00000481040 RRN3P2A6NIE6 340 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 PRSS47A8MTI9 375 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 EXOC5O00471 708 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 SNX2O60749 519 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 SEC24DO94855 1032 aaPredicted RBP6.3□□□□□ -1.4
COPA-203ENST00000481040 VEGFAP15692 232 aaPredicted RBP6.3□□□□□ -1.4
COPA-203ENST00000481040 NPR1P16066 1061 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 SUMO3P55854 103 aaPredicted RBP6.3□□□□□ -1.4
COPA-203ENST00000481040 CHRNEQ04844 493 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 GALNT1Q10472 559 aaPredicted RBP6.3□□□□□ -1.4
COPA-203ENST00000481040 IKZF1Q13422 519 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 SPPL2CQ8IUH8 684 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 CCDC89Q8N998 374 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 RAB24Q969Q5 203 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 ZNF566Q969W8 418 aa6.3□□□□□ -1.4
COPA-203ENST00000481040 VRK1Q99986 396 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms