RNA–Protein interactions for RNA: ENST00000443977.1

PRKD3-204, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 518 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-204ENST00000443977 TMX4Q9H1E5 349 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-204ENST00000443977 NDST4Q9H3R1 872 aa4.93□□□□□ -1.62
PRKD3-204ENST00000443977 MMRN2Q9H8L6 949 aa4.93□□□□□ -1.62
PRKD3-204ENST00000443977 TFCP2L1Q9NZI6 479 aa4.93□□□□□ -1.62
PRKD3-204ENST00000443977 SWAP70Q9UH65 585 aa4.93□□□□□ -1.62
PRKD3-204ENST00000443977 SUGT1Q9Y2Z0 365 aa4.93□□□□□ -1.62
PRKD3-204ENST00000443977 PCDHA13Q9Y5I0 950 aa4.93□□□□□ -1.62
PRKD3-204ENST00000443977 BZW2Q9Y6E2 419 aaKnown RBP4.93□□□□□ -1.62
PRKD3-204ENST00000443977 AHDC1Q5TGY3 1603 aaPredicted RBP4.93□□□□□ -1.62
PRKD3-204ENST00000443977 NAV1Q8NEY1 1877 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 GPR75-ASB3A0A0A6YYF3 556 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 PNMA6FA0A0J9YX94 578 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SHTN1A0MZ66 631 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 TRIM49BA6NDI0 452 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 GOLGA6BA6NDN3 693 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 TULP2O00295 520 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 FANCGO15287 622 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 PJA2O43164 708 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 LCA5LO95447 670 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 TSPAN15O95858 294 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SERPING1P05155 500 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 CYP2D6P10635 497 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 ANXA13P27216 316 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 CDR1P51861 262 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 EPHB4P54760 987 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 NAP1L1P55209 391 aaKnown RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 HERVK_113P62684 666 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 VSNL1P62760 191 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 ST5P78524 1137 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 DSC3Q14574 896 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 CLUL1Q15846 466 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 KCNMB1Q16558 191 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 MLANAQ16655 118 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 TXNRD1Q16881 649 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 CCDC40Q4G0X9 1142 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 NAALADL2Q58DX5 795 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 DNAJC21Q5F1R6 531 aaKnown RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SFMBT2Q5VUG0 894 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 PPP4R3AQ6IN85 833 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 WDR59Q6PJI9 974 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 ZNF572Q7Z3I7 529 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SPATS2Q86XZ4 545 aaKnown RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 C2CD5Q86YS7 1000 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 IRF2BP1Q8IU81 584 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SIAH1Q8IUQ4 282 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 TEX2Q8IWB9 1127 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 HOMEZQ8IX15 550 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 LRRC56Q8IYG6 542 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SLFN12Q8IYM2 578 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 MYOCDQ8IZQ8 938 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 PLD6Q8N2A8 252 aaKnown RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 EIF1ADQ8N9N8 165 aaKnown RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 FLAD1Q8NFF5 587 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 ERMNQ8TAM6 284 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SH3RF3Q8TEJ3 882 aaPredicted RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 COG1Q8WTW3 980 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 TAF4BQ92750 862 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 CUL5Q93034 780 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SHISA4Q96DD7 197 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 RBM17Q96I25 401 aaKnown RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 HRASLS5Q96KN8 279 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 CCDC17Q96LX7 622 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 PNKPQ96T60 521 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 DUSP9Q99956 384 aaKnown RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SELENOOQ9BVL4 669 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 MXD3Q9BW11 206 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 EHD4Q9H223 541 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 EPC1Q9H2F5 836 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 TMEM60Q9H2L4 133 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 RIOX1Q9H6W3 641 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 LIN7BQ9HAP6 207 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 ZCCHC17Q9NP64 241 aaKnown RBP4.92□□□□□ -1.62
PRKD3-204ENST00000443977 ST7Q9NRC1 585 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 IL17RBQ9NRM6 502 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 C1GALT1Q9NS00 363 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 CEP72Q9P209 647 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SNX12Q9UMY4 172 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 PCDHA12Q9UN75 941 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 FAN1Q9Y2M0 1017 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 MYO3BQ8WXR4 1341 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 SLIT2O94813 1529 aa4.92□□□□□ -1.62
PRKD3-204ENST00000443977 MACROD2A1Z1Q3 448 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 GRID2IPA4D2P6 1211 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 GOLGA6CA6NDK9 693 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 GOLGA6L10A6NI86 522 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 TRAF5O00463 557 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 EBAG9O00559 213 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 CES2O00748 559 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 CETN3O15182 167 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 TREHO43280 583 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 PPFIA4O75335 1185 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 ERLIN2O94905 339 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 TTLL1O95922 423 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 ATP1A1P05023 1023 aaKnown RBP4.91□□□□□ -1.62
PRKD3-204ENST00000443977 KRT18P05783 430 aaKnown RBP4.91□□□□□ -1.62
PRKD3-204ENST00000443977 HLA-DOAP06340 250 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 CCDC172P0C7W6 258 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 GOLGA6DP0CG33 693 aa4.91□□□□□ -1.62
PRKD3-204ENST00000443977 RPL13P26373 211 aaKnown RBP4.91□□□□□ -1.62
PRKD3-204ENST00000443977 TNFRSF8P28908 595 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms