RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 LPXNO60711 386 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 SLC34A2O95436 690 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 PIGRP01833 764 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 MCF2P10911 925 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 NMT1P30419 496 aaKnown RBP12.96□□□□□ -0.33
HSPG2-206ENST00000439717 SYKP43405 635 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 NDUFA8P51970 172 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 ALCAMQ13740 583 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 PTPROQ16827 1216 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 ZNF568Q3ZCX4 644 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 HERC4Q5GLZ8 1057 aaPredicted RBP12.96□□□□□ -0.33
HSPG2-206ENST00000439717 MPZL3Q6UWV2 235 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 FSIP1Q8NA03 581 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 GDPD5Q8WTR4 605 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 STAMQ92783 540 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 LMAN2LQ9H0V9 348 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 MRPL44Q9H9J2 332 aaKnown RBP12.96□□□□□ -0.33
HSPG2-206ENST00000439717 TBC1D13Q9NVG8 400 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 SERTAD1Q9UHV2 236 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.33
HSPG2-206ENST00000439717 TCHHQ07283 1943 aa12.96□□□□□ -0.34
HSPG2-206ENST00000439717 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 ABLIM1O14639 778 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 ACTN4O43707 911 aaKnown RBP12.95□□□□□ -0.34
HSPG2-206ENST00000439717 PPP1R37O75864 691 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 MYL1P05976 194 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 IGFBP4P22692 258 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 AKAP5P24588 427 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 PPM1AP35813 382 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 GRM5P41594 1212 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 ASIC1P78348 528 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 RNASELQ05823 741 aaKnown RBP12.95□□□□□ -0.34
HSPG2-206ENST00000439717 MAP4K3Q8IVH8 894 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 KLHL23Q8NBE8 558 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 BICD1Q96G01 975 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 ZNF558Q96NG5 402 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 GAD1Q99259 594 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 TCHPQ9BT92 498 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 APOL6Q9BWW8 343 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 STRA6Q9BX79 667 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 CDT1Q9H211 546 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 SNTG2Q9NY99 539 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 PARP2Q9UGN5 583 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 PLAGL2Q9UPG8 496 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 MTCH2Q9Y6C9 303 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 NLRC5Q86WI3 1866 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 CDH23Q9H251 3354 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 TRANK1O15050 2925 aa12.95□□□□□ -0.34
HSPG2-206ENST00000439717 PVALEFA0A1B0GWK0 134 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 HNRNPDLO14979 420 aaKnown RBP12.94□□□□□ -0.34
HSPG2-206ENST00000439717 CLDN3O15551 220 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 GCNT3O95395 438 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 MLH1P40692 756 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 AFMP43652 599 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 ALDH7A1P49419 539 aaKnown RBP12.94□□□□□ -0.34
HSPG2-206ENST00000439717 LIG4P49917 911 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 BCAR1P56945 870 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 PLCB3Q01970 1234 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 UBE3AQ05086 875 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 MCL1Q07820 350 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 COASYQ13057 564 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 NOLC1Q14978 699 aaKnown RBP eCLIP12.94□□□□□ -0.34
HSPG2-206ENST00000439717 KYAT1Q16773 422 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 ZC2HC1CQ53FD0 456 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-206ENST00000439717 KCNT2Q6UVM3 1135 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 STXBP4Q6ZWJ1 553 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 UNC13DQ70J99 1090 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 PAGE5Q96GU1 130 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 CCDC34Q96HJ3 373 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 FAM193BQ96PV7 902 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-206ENST00000439717 RPS6KC1Q96S38 1066 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 TMEM175Q9BSA9 504 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 CCDC94Q9BW85 323 aaPredicted RBP12.94□□□□□ -0.34
HSPG2-206ENST00000439717 GOLPH3LQ9H4A5 285 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 SPG21Q9NZD8 308 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 HCSTQ9UBK5 93 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 EXOC7Q9UPT5 735 aa12.94□□□□□ -0.34
HSPG2-206ENST00000439717 COL4A4P53420 1690 aaPredicted RBP12.93□□□□□ -0.34
HSPG2-206ENST00000439717 KIAA1671Q9BY89 1806 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 GRM6O15303 877 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ZC3H11AO75152 810 aaKnown RBP eCLIP12.93□□□□□ -0.34
HSPG2-206ENST00000439717 FGF18O76093 207 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 RECQL4O94761 1208 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ZNF202O95125 648 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 POMCP01189 267 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ITGB1P05556 798 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 SCNN1GP51170 649 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 AFF1P51825 1210 aaKnown RBP12.93□□□□□ -0.34
HSPG2-206ENST00000439717 YARSP54577 528 aaKnown RBP12.93□□□□□ -0.34
HSPG2-206ENST00000439717 KRT17Q04695 432 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 GRIK3Q13003 919 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 L1TD1Q5T7N2 865 aaKnown RBP12.93□□□□□ -0.34
HSPG2-206ENST00000439717 SLFN12LQ6IEE8 588 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 KANK3Q6NY19 840 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ZBTB33Q86T24 672 aa12.93□□□□□ -0.34
HSPG2-206ENST00000439717 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms