RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ZSWIM2Q8NEG5 633 aa25.09■■□□□ 1.61
CPSF4-204ENST00000436336 A0A1B0GUA9 196 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 GOLGA8IPA6NC78 632 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 GOLGA8JA6NMD2 632 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 VWA3BQ502W6 1294 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 MIIPQ5JXC2 388 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 C1orf53Q5VUE5 145 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 EEF1DP3Q658K8 133 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 CAGE1Q8TC20 777 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 CPB2Q96IY4 423 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 PDZD7Q9H5P4 517 aa25.08■■□□□ 1.61
CPSF4-204ENST00000436336 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.08■■□□□ 1.61
CPSF4-204ENST00000436336 TLR3O15455 904 aaKnown RBP25.07■■□□□ 1.6
CPSF4-204ENST00000436336 RBL2Q08999 1139 aa25.07■■□□□ 1.6
CPSF4-204ENST00000436336 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.07■■□□□ 1.6
CPSF4-204ENST00000436336 ZBTB33Q86T24 672 aa25.07■■□□□ 1.6
CPSF4-204ENST00000436336 CBWD2Q8IUF1 395 aa25.07■■□□□ 1.6
CPSF4-204ENST00000436336 CCDC155Q8N6L0 562 aa25.07■■□□□ 1.6
CPSF4-204ENST00000436336 DIS3LQ8TF46 1054 aaKnown RBP25.07■■□□□ 1.6
CPSF4-204ENST00000436336 FAM213AQ9BRX8 229 aa25.07■■□□□ 1.6
CPSF4-204ENST00000436336 AGPAT5Q9NUQ2 364 aa25.07■■□□□ 1.6
CPSF4-204ENST00000436336 INTS13Q9NVM9 706 aa25.07■■□□□ 1.6
CPSF4-204ENST00000436336 NOC2LQ9Y3T9 749 aaKnown RBP25.07■■□□□ 1.6
CPSF4-204ENST00000436336 ANK1P16157 1881 aa25.07■■□□□ 1.6
CPSF4-204ENST00000436336 ZNF233A6NK53 670 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 LGALS16A8MUM7 142 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 OGTO15294 1046 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 CKBP12277 381 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 KRT13P13646 458 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 CDC25BP30305 580 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 ATN1P54259 1190 aaPredicted RBP25.06■■□□□ 1.6
CPSF4-204ENST00000436336 BFSP1Q12934 665 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 ANKRD33Q7Z3H0 272 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 FAM228AQ86W67 206 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 CDT1Q9H211 546 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 NDST4Q9H3R1 872 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 KIAA0100Q14667 2235 aaKnown RBP25.06■■□□□ 1.6
CPSF4-204ENST00000436336 RPS6KA5O75582 802 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 ADRB2P07550 413 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 MCF2P10911 925 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 HARSP12081 509 aaKnown RBP25.06■■□□□ 1.6
CPSF4-204ENST00000436336 HOXA11P31270 313 aaPredicted RBP25.06■■□□□ 1.6
CPSF4-204ENST00000436336 MCCD1P59942 119 aaPredicted RBP25.06■■□□□ 1.6
CPSF4-204ENST00000436336 ZNF618Q5T7W0 954 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 NOTUMQ6P988 496 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 CDR2LQ86X02 465 aaPredicted RBP25.06■■□□□ 1.6
CPSF4-204ENST00000436336 MFSD14AQ96MC6 490 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 ADPGKQ9BRR6 497 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 C11orf49Q9H6J7 331 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 SQORQ9Y6N5 450 aa25.06■■□□□ 1.6
CPSF4-204ENST00000436336 PES1O00541 588 aaKnown RBP25.05■■□□□ 1.6
CPSF4-204ENST00000436336 TEX33O43247 280 aa25.05■■□□□ 1.6
CPSF4-204ENST00000436336 FAM189A1O60320 539 aa25.05■■□□□ 1.6
CPSF4-204ENST00000436336 FBXO47Q5MNV8 452 aa25.05■■□□□ 1.6
CPSF4-204ENST00000436336 CRELD2Q6UXH1 353 aaPredicted RBP25.05■■□□□ 1.6
CPSF4-204ENST00000436336 APBB1IPQ7Z5R6 666 aaPredicted RBP25.05■■□□□ 1.6
CPSF4-204ENST00000436336 PDLIM2Q96JY6 352 aa25.05■■□□□ 1.6
CPSF4-204ENST00000436336 TOX2Q96NM4 488 aa25.05■■□□□ 1.6
CPSF4-204ENST00000436336 CITO14578 2027 aa25.05■■□□□ 1.6
CPSF4-204ENST00000436336 TANC1Q9C0D5 1861 aa25.05■■□□□ 1.6
CPSF4-204ENST00000436336 PQBP1O60828 265 aaKnown RBP25.04■■□□□ 1.6
CPSF4-204ENST00000436336 ACOT2P49753 483 aa25.04■■□□□ 1.6
CPSF4-204ENST00000436336 ENPEPQ07075 957 aa25.04■■□□□ 1.6
CPSF4-204ENST00000436336 CCDC173Q0VFZ6 552 aa25.04■■□□□ 1.6
CPSF4-204ENST00000436336 BFSP2Q13515 415 aa25.04■■□□□ 1.6
CPSF4-204ENST00000436336 DCAF17Q5H9S7 520 aaPredicted RBP25.04■■□□□ 1.6
CPSF4-204ENST00000436336 TCERG1LQ5VWI1 586 aa25.04■■□□□ 1.6
CPSF4-204ENST00000436336 SLC35C1Q96A29 364 aa25.04■■□□□ 1.6
CPSF4-204ENST00000436336 PAWRQ96IZ0 340 aaKnown RBP25.04■■□□□ 1.6
CPSF4-204ENST00000436336 GPR182O15218 404 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 VAMP7P51809 220 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 UBXN1Q04323 297 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 CYP24A1Q07973 514 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 KCNH2Q12809 1159 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 DCAF4L1Q3SXM0 396 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 FKBP15Q5T1M5 1219 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 SLC27A1Q6PCB7 646 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 USP37Q86T82 979 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 USP38Q8NB14 1042 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 PIN4Q9Y237 131 aaKnown RBP25.03■■□□□ 1.6
CPSF4-204ENST00000436336 DCDC2CA8MYV0 355 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 AFPP02771 609 aaKnown RBP25.03■■□□□ 1.6
CPSF4-204ENST00000436336 KYAT1Q16773 422 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 TRAF7Q6Q0C0 670 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 TMC2Q8TDI7 906 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 CCDC51Q96ER9 411 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 CPSF3Q9UKF6 684 aaKnown RBP25.03■■□□□ 1.6
CPSF4-204ENST00000436336 ST3GAL5Q9UNP4 418 aa25.03■■□□□ 1.6
CPSF4-204ENST00000436336 RALGAPA2Q2PPJ7 1873 aa25.02■■□□□ 1.6
CPSF4-204ENST00000436336 ZBTB41Q5SVQ8 909 aa25.02■■□□□ 1.6
CPSF4-204ENST00000436336 NECAB2Q7Z6G3 386 aa25.02■■□□□ 1.6
CPSF4-204ENST00000436336 RBAKQ9NYW8 714 aaPredicted RBP25.02■■□□□ 1.6
CPSF4-204ENST00000436336 PITPNM1O00562 1244 aa25.01■■□□□ 1.59
CPSF4-204ENST00000436336 LPIN1Q14693 890 aa25.01■■□□□ 1.59
CPSF4-204ENST00000436336 TRIM60Q495X7 471 aa25.01■■□□□ 1.59
CPSF4-204ENST00000436336 VSTM4Q8IW00 320 aa25.01■■□□□ 1.59
CPSF4-204ENST00000436336 THNSL1Q8IYQ7 743 aa25.01■■□□□ 1.59
CPSF4-204ENST00000436336 PARD3BQ8TEW8 1205 aa25.01■■□□□ 1.59
CPSF4-204ENST00000436336 PPP1R9BQ96SB3 815 aa25.01■■□□□ 1.59
CPSF4-204ENST00000436336 A0A1W2PQC6 194 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms