RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ACTN1P12814 892 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 ACOT2P49753 483 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 PRMT2P55345 433 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 MYL7Q01449 175 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 ENPEPQ07075 957 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 ZBTB41Q5SVQ8 909 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 CCSAPQ6IQ19 270 aaPredicted RBP25.2■■□□□ 1.63
SDF4-202ENST00000360001 CCDC127Q96BQ5 260 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 ADAMTS10Q9H324 1103 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 SIX2Q9NPC8 291 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 DDX20Q9UHI6 824 aaKnown RBP25.2■■□□□ 1.63
SDF4-202ENST00000360001 TSKSQ9UJT2 592 aa25.2■■□□□ 1.63
SDF4-202ENST00000360001 LRRIQ3A6PVS8 624 aaPredicted RBP25.2■■□□□ 1.62
SDF4-202ENST00000360001 FAM189A1O60320 539 aa25.2■■□□□ 1.62
SDF4-202ENST00000360001 LDHAP00338 332 aaKnown RBP25.2■■□□□ 1.62
SDF4-202ENST00000360001 CST5P28325 142 aaPredicted RBP25.2■■□□□ 1.62
SDF4-202ENST00000360001 MCL1Q07820 350 aa25.2■■□□□ 1.62
SDF4-202ENST00000360001 ATF7IP2Q5U623 682 aa25.2■■□□□ 1.62
SDF4-202ENST00000360001 WDR59Q6PJI9 974 aa25.2■■□□□ 1.62
SDF4-202ENST00000360001 SLAIN1Q8ND83 568 aa25.2■■□□□ 1.62
SDF4-202ENST00000360001 INHAP05111 366 aa25.19■■□□□ 1.62
SDF4-202ENST00000360001 GCLMP48507 274 aa25.19■■□□□ 1.62
SDF4-202ENST00000360001 KIZQ2M2Z5 673 aa25.19■■□□□ 1.62
SDF4-202ENST00000360001 KLHDC7AQ5VTJ3 777 aa25.19■■□□□ 1.62
SDF4-202ENST00000360001 SOWAHDA6NJG2 315 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 GPR32O75388 356 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 GNAT1P11488 350 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 POLR2FP61218 127 aaKnown RBP25.18■■□□□ 1.62
SDF4-202ENST00000360001 HSP90AA2PQ14568 343 aaPredicted RBP25.18■■□□□ 1.62
SDF4-202ENST00000360001 KCNA10Q16322 511 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 MEA1Q16626 185 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 NBPF20Q3BBV1 942 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 E4F1Q66K89 784 aaPredicted RBP25.18■■□□□ 1.62
SDF4-202ENST00000360001 MPZL3Q6UWV2 235 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 ZBTB33Q86T24 672 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 SCLT1Q96NL6 688 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 TCHPQ9BT92 498 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 SPTLC3Q9NUV7 552 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 TNFSF13BQ9Y275 285 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 CNTNAP2Q9UHC6 1331 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 PMM2O15305 246 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 P4HA2O15460 535 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 N4BP1O75113 896 aaKnown RBP25.18■■□□□ 1.62
SDF4-202ENST00000360001 ASGR1P07306 291 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 HARSP12081 509 aaKnown RBP25.18■■□□□ 1.62
SDF4-202ENST00000360001 CDC42EP1Q00587 391 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 MAP2K1Q02750 393 aaPredicted RBP25.18■■□□□ 1.62
SDF4-202ENST00000360001 TMEM62Q0P6H9 643 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 NOLC1Q14978 699 aaKnown RBP eCLIP25.18■■□□□ 1.623e-6■■□□□ 12.8
SDF4-202ENST00000360001 PSMD6Q15008 389 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 TRIM65Q6PJ69 517 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 CACNA2D4Q7Z3S7 1137 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 SRGAP1Q7Z6B7 1085 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 TMTC1Q8IUR5 882 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 DNAJB3Q8WWF6 145 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 PRIMPOLQ96LW4 560 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 POP1Q99575 1024 aaKnown RBP25.18■■□□□ 1.62
SDF4-202ENST00000360001 TMEM117Q9H0C3 514 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 NLRC4Q9NPP4 1024 aa25.18■■□□□ 1.62
SDF4-202ENST00000360001 HNRNPH3P31942 346 aaKnown RBP25.17■■□□□ 1.62
SDF4-202ENST00000360001 TSR1Q2NL82 804 aaKnown RBP25.17■■□□□ 1.62
SDF4-202ENST00000360001 EEF1DP3Q658K8 133 aa25.17■■□□□ 1.62
SDF4-202ENST00000360001 PDXDC1Q6P996 788 aa25.17■■□□□ 1.62
SDF4-202ENST00000360001 RRAGAQ7L523 313 aa25.17■■□□□ 1.62
SDF4-202ENST00000360001 USP37Q86T82 979 aa25.17■■□□□ 1.62
SDF4-202ENST00000360001 TOPORSQ9NS56 1045 aaPredicted RBP25.17■■□□□ 1.62
SDF4-202ENST00000360001 PLAGL2Q9UPG8 496 aa25.17■■□□□ 1.62
SDF4-202ENST00000360001 LRRC53A6NM62 1247 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 UCHL3P15374 230 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 MXI1P50539 228 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 WNT7BP56706 349 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 MTF1Q14872 753 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 SEZ6Q53EL9 994 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 CYP26C1Q6V0L0 522 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 RAD9BQ6WBX8 426 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 LMO3Q8TAP4 145 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 CHP1Q99653 195 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 INTS2Q9H0H0 1204 aaKnown RBP25.16■■□□□ 1.62
SDF4-202ENST00000360001 CDHR5Q9HBB8 845 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 KCND1Q9NSA2 647 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 RBAKQ9NYW8 714 aaPredicted RBP25.16■■□□□ 1.62
SDF4-202ENST00000360001 GTF2IRD1Q9UHL9 959 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 PTCH2Q9Y6C5 1203 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 OGTO15294 1046 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 MYCNP04198 464 aaPredicted RBP25.16■■□□□ 1.62
SDF4-202ENST00000360001 GRK4P32298 578 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 CLDN10P78369 228 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 ZNF568Q3ZCX4 644 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 EPC2Q52LR7 807 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 FBXL5Q9UKA1 691 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 TRIM17Q9Y577 477 aa25.16■■□□□ 1.62
SDF4-202ENST00000360001 DLATP10515 647 aaKnown RBP25.15■■□□□ 1.62
SDF4-202ENST00000360001 GTF2H1P32780 548 aa25.15■■□□□ 1.62
SDF4-202ENST00000360001 TMEM132AQ24JP5 1023 aa25.15■■□□□ 1.62
SDF4-202ENST00000360001 CDR2LQ86X02 465 aaPredicted RBP25.15■■□□□ 1.62
SDF4-202ENST00000360001 TMEM8AQ9HCN3 771 aa25.15■■□□□ 1.62
SDF4-202ENST00000360001 FHOD1Q9Y613 1164 aa25.15■■□□□ 1.62
SDF4-202ENST00000360001 USP27XA6NNY8 438 aa25.14■■□□□ 1.62
SDF4-202ENST00000360001 TSPAN1O60635 241 aa25.14■■□□□ 1.62
SDF4-202ENST00000360001 ARF4P18085 180 aaPredicted RBP25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms