RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 DCAF15Q66K64 600 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 TRAF7Q6Q0C0 670 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 PATL1Q86TB9 770 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 JADE3Q92613 823 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 PABPC3Q9H361 631 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 ZWILCHQ9H900 591 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 GOLGA8JA6NMD2 632 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 SNX2O60749 519 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 PDIA5Q14554 519 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 EDRF1Q3B7T1 1238 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 MCPH1Q8NEM0 835 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 MAGEB18Q96M61 343 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 CNPY3Q9BT09 278 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 PHF23Q9BUL5 403 aaPredicted RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 HEMGNQ9BXL5 484 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 INTS2Q9H0H0 1204 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 B2RBV5 119 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 PDXKO00764 312 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 TTC33Q6PID6 262 aaPredicted RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 ADSSL1Q8N142 457 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 B4GALNT2Q8NHY0 566 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 LRRC4Q9HBW1 653 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 NSMCE4AQ9NXX6 385 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 GGA2Q9UJY4 613 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 CPSF3Q9UKF6 684 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 CATSPER3Q86XQ3 398 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 DNAJC10Q8IXB1 793 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 OTUB1Q96FW1 271 aaPredicted RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 STRBPQ96SI9 672 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 HSD17B3P37058 310 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 ARSEP51690 589 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 RAB14P61106 215 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 NAIF1Q69YI7 327 aaPredicted RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 NOA1Q8NC60 698 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 CEP170P1Q96L14 293 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 THTPAQ9BU02 230 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 GIMAP4Q9NUV9 329 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 SEPT9Q9UHD8 586 aaPredicted RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 KIAA0391O15091 583 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 HEATR6Q6AI08 1181 aaKnown RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 ETAA1Q9NY74 926 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 KLHL8Q9P2G9 620 aaPredicted RBP8.68□□□□□ -1.02
APOB-201ENST00000233242 FAM170AA1A519 330 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 AP3M2P53677 418 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 CENPCQ03188 943 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 KRT35Q92764 455 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 MSTO1Q9BUK6 570 aa8.68□□□□□ -1.02
APOB-201ENST00000233242 ATP5BP06576 529 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 RCN1Q15293 331 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 BHMT2Q9H2M3 363 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 HACD3Q9P035 362 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 PPIP5K2O43314 1243 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 USP11P51784 963 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 BCAR1P56945 870 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 CYGBQ8WWM9 190 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 MANSC1Q9H8J5 431 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 PARVAQ9NVD7 372 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SERPINB13Q9UIV8 391 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ECM2O94769 699 aaPredicted RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 CALB2P22676 271 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ALDH1B1P30837 517 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 DPYDQ12882 1025 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 DLGAP5Q15398 846 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 MED14O60244 1454 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ATP6V1E1P36543 226 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SEC24CP53992 1094 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 TSPAN17Q96FV3 270 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 LY9Q9HBG7 655 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ABCB11O95342 1321 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 CLPTM1O96005 669 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ZBTB41Q5SVQ8 909 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 BTBD7Q9P203 1132 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 EIF4E1BA6NMX2 242 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 KIF22Q14807 665 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 GJC2Q5T442 439 aaPredicted RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 PNKPQ96T60 521 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 CDV3Q9UKY7 258 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 DTNAQ9Y4J8 743 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 PDS5AQ29RF7 1337 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 USP42Q9H9J4 1324 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 ADAMTS12P58397 1594 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 PYGMP11217 842 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 TCP10Q12799 353 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 GLYCTKQ8IVS8 523 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 DCAF4Q8WV16 495 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 PLEKHG2Q9H7P9 1386 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ZNF804BA4D1E1 1349 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SPDYE2BA6NHP3 402 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 H2AFYO75367 372 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 SPDYE6P0CI01 402 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 PHKG2P15735 406 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 ZNF667Q5HYK9 610 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SYDE2Q5VT97 1194 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 HEXIM2Q96MH2 286 aaKnown RBP8.67□□□□□ -1.02
APOB-201ENST00000233242 RXFP1Q9HBX9 757 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 RAB21Q9UL25 225 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 SESN1Q9Y6P5 492 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 RAD51CO43502 376 aa8.67□□□□□ -1.02
APOB-201ENST00000233242 CRELD2Q6UXH1 353 aaPredicted RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms