RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 ACOT2P49753 483 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CRELD2Q6UXH1 353 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TRPV1Q8NER1 839 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 SPAG5Q96R06 1193 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 WDR24Q96S15 920 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MSTO1Q9BUK6 570 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 NFKBIZQ9BYH8 718 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MINDY3Q9H8M7 445 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 AIPL1Q9NZN9 384 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 APEX2Q9UBZ4 518 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 Q9Y3F1 56 aa21.36■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ANK1P16157 1881 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TOM1L1O75674 476 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TBC1D8O95759 1140 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TMOD1P28289 359 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CPT1AP50416 773 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 JAM2P57087 298 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 KIAA0753Q2KHM9 967 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 EPC2Q52LR7 807 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 IQCEQ6IPM2 695 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 USP37Q86T82 979 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ACO2Q99798 780 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 FZD8Q9H461 694 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 EIF3CLB5ME19 914 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CLDN3O15551 220 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 LRRN2O75325 713 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 AKR1A1P14550 325 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 EIF4A3P38919 411 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 PRKCZQ05513 592 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MBTD1Q05BQ5 628 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ENPEPQ07075 957 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CETN1Q12798 172 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ELF2Q15723 593 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 REM2Q8IYK8 340 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 EHBP1Q8NDI1 1231 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 LMBR1Q8WVP7 490 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 EIF3CQ99613 913 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 LZTFL1Q9NQ48 299 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TOPORSQ9NS56 1045 aaPredicted RBP21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 SETD4Q9NVD3 440 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MYO6Q9UM54 1294 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 AKT3Q9Y243 479 aa21.35■■□□□ 1.01
TNFRSF1A-201ENST00000162749 INO80B-WBP1J3KQ70 363 aa21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 VTNP04004 478 aa21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 IQCF3P0C7M6 154 aa21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 DLATP10515 647 aaKnown RBP21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CYBAP13498 195 aa21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MATR3P43243 847 aaKnown RBP eCLIP21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 POU5F1BQ06416 359 aa21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 SLC9C1Q4G0N8 1177 aa21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ZBTB41Q5SVQ8 909 aa21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 INO80BQ9C086 356 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ACKR2O00590 384 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 LDHAP00338 332 aaKnown RBP21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 APLP1P51693 650 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 KIF11P52732 1056 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 CHMP4BP1P59074 171 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 BEX3Q00994 111 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MAP2K1Q02750 393 aaPredicted RBP21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 ARID5AQ03989 594 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TDRD12Q587J7 1177 aaKnown RBP21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 KRT39Q6A163 491 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 AP5M1Q9H0R1 490 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 TMEM8AQ9HCN3 771 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 MYH10P35580 1976 aa21.33■■□□□ 1.01
TNFRSF1A-201ENST00000162749 A0A087WZ62 844 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 SSU72P8A0A1W2PR75 194 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 ABLIM1O14639 778 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 ZNF263O14978 683 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 FAM189A1O60320 539 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 SERPING1P05155 500 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 WNT7BP56706 349 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 GNG11P61952 73 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 SP3Q02447 781 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 MAPK8IP2Q13387 824 aaPredicted RBP21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 ASTE1Q2TB18 679 aaPredicted RBP21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 PHLDB3Q6NSJ2 640 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 PPP1R16BQ96T49 567 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 FDXACB1Q9BRP7 624 aaPredicted RBP21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 DEF6Q9H4E7 631 aa21.33■■□□□ 1
TNFRSF1A-201ENST00000162749 NRCAMQ92823 1304 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 SCN10AQ9Y5Y9 1956 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 TULP1O00294 542 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 ABL1P00519 1130 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 SMIM10L2AP0DMW4 78 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 SMIM10L2BP0DMW5 78 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 PHKA2P46019 1235 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 CLDN10P78369 228 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 IRF2BP2Q7Z5L9 587 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 IFNLR1Q8IU57 520 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 PPP1R13LQ8WUF5 828 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 DNAJC12Q9UKB3 198 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 COQ4Q9Y3A0 265 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 RRN3P2A6NIE6 340 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 B4GALT5O43286 388 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 URI1O94763 535 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 IPO7O95373 1038 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 LCA5LO95447 670 aa21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 HARSP12081 509 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-201ENST00000162749 PROZP22891 400 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms