RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A DPB11P47027 764 aaPredicted RBP13.84□□□□□ -0.19
TRN1tP(UGG)A PAU12P53343 120 aa13.84□□□□□ -0.19
TRN1tP(UGG)A RVB1Q03940 463 aaKnown RBP13.84□□□□□ -0.19
TRN1tP(UGG)A RRP17Q04031 235 aaPredicted RBP13.84□□□□□ -0.19
TRN1tP(UGG)A TY1A-BLQ12266 440 aa13.84□□□□□ -0.19
TRN1tP(UGG)A TRA1P38811 3744 aa13.83□□□□□ -0.2
TRN1tP(UGG)A DPB2P24482 689 aaPredicted RBP13.83□□□□□ -0.2
TRN1tP(UGG)A FUN26P31381 517 aa13.83□□□□□ -0.2
TRN1tP(UGG)A YPK3P38070 525 aa13.83□□□□□ -0.2
TRN1tP(UGG)A PTH1P38876 190 aaKnown RBP13.83□□□□□ -0.2
TRN1tP(UGG)A PCL6P40038 420 aa13.83□□□□□ -0.2
TRN1tP(UGG)A PAM16P42949 149 aa13.83□□□□□ -0.2
TRN1tP(UGG)A SCW11P53189 542 aa13.83□□□□□ -0.2
TRN1tP(UGG)A PDE2P06776 526 aa13.82□□□□□ -0.2
TRN1tP(UGG)A YMR262WP38430 313 aa13.82□□□□□ -0.2
TRN1tP(UGG)A ELA1P53861 379 aaPredicted RBP13.82□□□□□ -0.2
TRN1tP(UGG)A GRX3Q03835 250 aa13.82□□□□□ -0.2
TRN1tP(UGG)A YMR252CQ04814 134 aa13.82□□□□□ -0.2
TRN1tP(UGG)A FMP42Q04991 504 aa13.82□□□□□ -0.2
TRN1tP(UGG)A NNT1Q05874 261 aa13.82□□□□□ -0.2
TRN1tP(UGG)A IES3Q12345 250 aa13.82□□□□□ -0.2
TRN1tP(UGG)A YPR1Q12458 312 aa13.82□□□□□ -0.2
TRN1tP(UGG)A FRE6Q12473 712 aa13.82□□□□□ -0.2
TRN1tP(UGG)A YEL009C-AA0A023PZF2 135 aa13.81□□□□□ -0.2
TRN1tP(UGG)A EXG1P23776 448 aaKnown RBP13.81□□□□□ -0.2
TRN1tP(UGG)A RPL5P26321 297 aaKnown RBP13.81□□□□□ -0.2
TRN1tP(UGG)A SBA1P28707 216 aaKnown RBP13.81□□□□□ -0.2
TRN1tP(UGG)A PAU24P38155 120 aa13.81□□□□□ -0.2
TRN1tP(UGG)A MTC6P38849 526 aa13.81□□□□□ -0.2
TRN1tP(UGG)A YAE1P47118 141 aaPredicted RBP13.81□□□□□ -0.2
TRN1tP(UGG)A PCP1P53259 346 aa13.81□□□□□ -0.2
TRN1tP(UGG)A GAL83Q04739 417 aa13.81□□□□□ -0.2
TRN1tP(UGG)A MCH4Q08268 501 aa13.81□□□□□ -0.2
TRN1tP(UGG)A SLZ1P40167 298 aa13.8□□□□□ -0.2
TRN1tP(UGG)A PMT6P42934 759 aa13.8□□□□□ -0.2
TRN1tP(UGG)A MRPL19P53875 158 aa13.8□□□□□ -0.2
TRN1tP(UGG)A RAF1Q06891 181 aa13.8□□□□□ -0.2
TRN1tP(UGG)A FOL3Q12676 427 aaPredicted RBP13.8□□□□□ -0.2
TRN1tP(UGG)A DBF2P22204 572 aa13.79□□□□□ -0.2
TRN1tP(UGG)A MEK1P24719 497 aaPredicted RBP13.79□□□□□ -0.2
TRN1tP(UGG)A SED4P25365 1065 aa13.79□□□□□ -0.2
TRN1tP(UGG)A FMP23P38231 175 aa13.79□□□□□ -0.2
TRN1tP(UGG)A RMD9P53140 646 aaKnown RBP13.79□□□□□ -0.2
TRN1tP(UGG)A MKC7P53379 596 aa13.79□□□□□ -0.2
TRN1tP(UGG)A ALG12P53730 551 aa13.79□□□□□ -0.2
TRN1tP(UGG)A AIM36Q03798 255 aa13.79□□□□□ -0.2
TRN1tP(UGG)A HLR1Q04429 423 aa13.79□□□□□ -0.2
TRN1tP(UGG)A YLR099W-AQ3E798 87 aa13.79□□□□□ -0.2
TRN1tP(UGG)A PRB1P09232 635 aa13.78□□□□□ -0.2
TRN1tP(UGG)A RPS16AP0CX51 143 aaKnown RBP13.78□□□□□ -0.2
TRN1tP(UGG)A RPS16BP0CX52 143 aaKnown RBP13.78□□□□□ -0.2
TRN1tP(UGG)A MAK32P23060 363 aa13.78□□□□□ -0.2
TRN1tP(UGG)A PRE7P23724 241 aaKnown RBP13.78□□□□□ -0.2
TRN1tP(UGG)A AHC2P25649 128 aa13.78□□□□□ -0.2
TRN1tP(UGG)A VPS17P32913 551 aa13.78□□□□□ -0.2
TRN1tP(UGG)A SPT10P35208 640 aa13.78□□□□□ -0.2
TRN1tP(UGG)A JLP2P40206 208 aa13.78□□□□□ -0.2
TRN1tP(UGG)A YJL218WP40892 196 aaKnown RBP13.78□□□□□ -0.2
TRN1tP(UGG)A SSY1Q03770 852 aa13.78□□□□□ -0.2
TRN1tP(UGG)A RTN2Q12443 393 aa13.78□□□□□ -0.2
TRN1tP(UGG)A REP1P03871 373 aa13.77□□□□□ -0.21
TRN1tP(UGG)A HEM4P06174 275 aa13.77□□□□□ -0.21
TRN1tP(UGG)A SIR2P06700 562 aa13.77□□□□□ -0.21
TRN1tP(UGG)A MCM1P11746 286 aa13.77□□□□□ -0.21
TRN1tP(UGG)A RSM22P36056 628 aa13.77□□□□□ -0.21
TRN1tP(UGG)A ANR2P36090 516 aaPredicted RBP13.77□□□□□ -0.21
TRN1tP(UGG)A GPX2P38143 162 aa13.77□□□□□ -0.21
TRN1tP(UGG)A PEX32P38292 413 aa13.77□□□□□ -0.21
TRN1tP(UGG)A TIR3P40552 269 aa13.77□□□□□ -0.21
TRN1tP(UGG)A GPP1P41277 250 aaKnown RBP13.77□□□□□ -0.21
TRN1tP(UGG)A CCC1P47818 322 aa13.77□□□□□ -0.21
TRN1tP(UGG)A YDR514CQ04408 483 aa13.77□□□□□ -0.21
TRN1tP(UGG)A RRI1Q12468 440 aa13.77□□□□□ -0.21
TRN1tP(UGG)A MRP1P10662 321 aaKnown RBP13.76□□□□□ -0.21
TRN1tP(UGG)A ITR1P30605 584 aa13.76□□□□□ -0.21
TRN1tP(UGG)A MTH1P35198 433 aa13.76□□□□□ -0.21
TRN1tP(UGG)A IDP2P41939 412 aa13.76□□□□□ -0.21
TRN1tP(UGG)A YAP6Q03935 383 aa13.76□□□□□ -0.21
TRN1tP(UGG)A CRR1Q05790 422 aa13.76□□□□□ -0.21
TRN1tP(UGG)A BRE4Q07660 1125 aa13.76□□□□□ -0.21
TRN1tP(UGG)A PCL1P24867 279 aa13.75□□□□□ -0.21
TRN1tP(UGG)A GDS1P41913 522 aa13.75□□□□□ -0.21
TRN1tP(UGG)A YNL165WP53891 406 aa13.75□□□□□ -0.21
TRN1tP(UGG)A SRL4Q03085 281 aa13.75□□□□□ -0.21
TRN1tP(UGG)A RCF1Q03713 159 aa13.75□□□□□ -0.21
TRN1tP(UGG)A TSR2Q06672 205 aaKnown RBP13.75□□□□□ -0.21
TRN1tP(UGG)A NOP56Q12460 504 aaKnown RBP RIP-Chip data13.75□□□□□ -0.21not detected
TRN1tP(UGG)A SCEIP03882 235 aa13.74□□□□□ -0.21
TRN1tP(UGG)A COX9P07255 59 aa13.74□□□□□ -0.21
TRN1tP(UGG)A DOA4P32571 926 aa13.74□□□□□ -0.21
TRN1tP(UGG)A SLS1P42900 643 aa13.74□□□□□ -0.21
TRN1tP(UGG)A SAM50P53969 484 aa13.74□□□□□ -0.21
TRN1tP(UGG)A CDC31P06704 161 aaKnown RBP13.73□□□□□ -0.21
TRN1tP(UGG)A ERG4P25340 473 aa13.73□□□□□ -0.21
TRN1tP(UGG)A UTP11P34247 250 aaPredicted RBP13.73□□□□□ -0.21
TRN1tP(UGG)A NIT3P49954 291 aa13.73□□□□□ -0.21
TRN1tP(UGG)A PMT5P52867 743 aa13.73□□□□□ -0.21
TRN1tP(UGG)A CPR8P53728 308 aa13.73□□□□□ -0.21
TRN1tP(UGG)A YDR387CQ04162 555 aa13.73□□□□□ -0.21
TRN1tP(UGG)A MCT1Q12283 360 aa13.73□□□□□ -0.21
Retrieved 100 of 5,963 RNA–protein pairs in 83.8 ms