RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C TMS1Q12116 473 aa5.48□□□□□ -1.53
VPS4YPR173C EAF3Q12432 401 aa5.48□□□□□ -1.53
VPS4YPR173C RRI1Q12468 440 aa5.48□□□□□ -1.53
VPS4YPR173C SOD2P00447 233 aa5.48□□□□□ -1.53
VPS4YPR173C CWH43P25618 953 aa5.48□□□□□ -1.53
VPS4YPR173C MCM10P32354 571 aa5.48□□□□□ -1.53
VPS4YPR173C PXA2P34230 853 aa5.48□□□□□ -1.53
VPS4YPR173C ECM15P35195 104 aa5.48□□□□□ -1.53
VPS4YPR173C BNA4P38169 460 aa5.48□□□□□ -1.53
VPS4YPR173C CDS1P38221 457 aa5.48□□□□□ -1.53
VPS4YPR173C MTC4P38335 694 aaKnown RBP5.48□□□□□ -1.53
VPS4YPR173C ARO9P38840 513 aaPredicted RBP5.48□□□□□ -1.53
VPS4YPR173C ASP1P38986 381 aaPredicted RBP5.48□□□□□ -1.53
VPS4YPR173C MMF1P40185 145 aaKnown RBP5.48□□□□□ -1.53
VPS4YPR173C PGD1P40356 397 aa5.48□□□□□ -1.53
VPS4YPR173C MRX5P47007 382 aa5.48□□□□□ -1.53
VPS4YPR173C MOG1P47123 218 aa5.48□□□□□ -1.53
VPS4YPR173C IBA57P47158 497 aa5.48□□□□□ -1.53
VPS4YPR173C ERV25P54837 211 aaKnown RBP5.48□□□□□ -1.53
VPS4YPR173C RHO4Q00246 291 aa5.48□□□□□ -1.53
VPS4YPR173C CAC2Q04199 468 aa5.48□□□□□ -1.53
VPS4YPR173C GRC3Q07845 632 aa5.48□□□□□ -1.53
VPS4YPR173C YOR385WQ08909 290 aa5.48□□□□□ -1.53
VPS4YPR173C RTC5Q12108 567 aaKnown RBP5.48□□□□□ -1.53
VPS4YPR173C YPR064WQ12492 139 aa5.48□□□□□ -1.53
VPS4YPR173C SKS1Q12505 502 aa5.48□□□□□ -1.53
VPS4YPR173C VMA9Q3E7B6 73 aa5.48□□□□□ -1.53
VPS4YPR173C YKL033W-AQ86ZR7 236 aa5.48□□□□□ -1.53
VPS4YPR173C HBN1Q96VH4 193 aa5.48□□□□□ -1.53
VPS4YPR173C ISN1Q99312 450 aa5.48□□□□□ -1.53
VPS4YPR173C ADE8P04161 214 aa5.47□□□□□ -1.53
VPS4YPR173C PRB1P09232 635 aa5.47□□□□□ -1.53
VPS4YPR173C HOM2P13663 365 aaKnown RBP5.47□□□□□ -1.53
VPS4YPR173C ZRC1P20107 442 aa5.47□□□□□ -1.53
VPS4YPR173C MCK1P21965 375 aaKnown RBP5.47□□□□□ -1.53
VPS4YPR173C BOS1P25385 244 aa5.47□□□□□ -1.53
VPS4YPR173C PUT3P25502 979 aaPredicted RBP5.47□□□□□ -1.53
VPS4YPR173C FUN19P28003 413 aaPredicted RBP5.47□□□□□ -1.53
VPS4YPR173C YEF1P32622 495 aa5.47□□□□□ -1.53
VPS4YPR173C FLO10P36170 1169 aa5.47□□□□□ -1.53
VPS4YPR173C RRN10P38204 145 aa5.47□□□□□ -1.53
VPS4YPR173C MNT3P40549 630 aa5.47□□□□□ -1.53
VPS4YPR173C RPL10P41805 221 aaKnown RBP5.47□□□□□ -1.53
VPS4YPR173C MCM22P47167 239 aa5.47□□□□□ -1.53
VPS4YPR173C SSN8P47821 323 aa5.47□□□□□ -1.53
VPS4YPR173C SRB7P47822 140 aa5.47□□□□□ -1.53
VPS4YPR173C VHT1P53241 593 aa5.47□□□□□ -1.53
VPS4YPR173C GIM3P53900 129 aa5.47□□□□□ -1.53
VPS4YPR173C CTL1Q03220 320 aaKnown RBP5.47□□□□□ -1.53
VPS4YPR173C CYK3Q07533 885 aa5.47□□□□□ -1.53
VPS4YPR173C RRP40Q08285 240 aaKnown RBP5.47□□□□□ -1.53
VPS4YPR173C YDL177CQ12257 170 aa5.47□□□□□ -1.53
VPS4YPR173C SUL2Q12325 893 aa5.47□□□□□ -1.53
VPS4YPR173C YPR071WQ12346 211 aa5.47□□□□□ -1.53
VPS4YPR173C PDH1Q12428 516 aaKnown RBP5.47□□□□□ -1.53
VPS4YPR173C CMC2Q3E7A4 109 aa5.47□□□□□ -1.53
VPS4YPR173C YLR422WQ06409 1932 aa5.46□□□□□ -1.54
VPS4YPR173C GAL1P04385 528 aa5.46□□□□□ -1.54
VPS4YPR173C SSA3P09435 649 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C CBS1P14066 229 aa5.46□□□□□ -1.54
VPS4YPR173C YCL002CP25565 263 aa5.46□□□□□ -1.54
VPS4YPR173C ERG24P32462 438 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C VAM7P32912 316 aa5.46□□□□□ -1.54
VPS4YPR173C BET3P36149 193 aa5.46□□□□□ -1.54
VPS4YPR173C SHM2P37291 469 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C PRS3P38689 320 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C IMD2P38697 523 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C MET30P39014 640 aa5.46□□□□□ -1.54
VPS4YPR173C SMB1P40018 196 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C POG1P40473 351 aa5.46□□□□□ -1.54
VPS4YPR173C UBX6P47049 396 aa5.46□□□□□ -1.54
VPS4YPR173C YGL204CP53089 101 aa5.46□□□□□ -1.54
VPS4YPR173C SEC13Q04491 297 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C VBA4Q04602 768 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C NAT4Q04751 285 aa5.46□□□□□ -1.54
VPS4YPR173C AHC1Q12433 566 aa5.46□□□□□ -1.54
VPS4YPR173C PNO1Q99216 274 aaKnown RBP5.46□□□□□ -1.54
VPS4YPR173C KIN28P06242 306 aa5.45□□□□□ -1.54
VPS4YPR173C ADK1P07170 222 aaKnown RBP5.45□□□□□ -1.54
VPS4YPR173C PHO2P07269 559 aa5.45□□□□□ -1.54
VPS4YPR173C REV1P12689 985 aa5.45□□□□□ -1.54
VPS4YPR173C SEC22P22214 214 aa5.45□□□□□ -1.54
VPS4YPR173C SED4P25365 1065 aa5.45□□□□□ -1.54
VPS4YPR173C CNE1P27825 502 aa5.45□□□□□ -1.54
VPS4YPR173C RPD3P32561 433 aa5.45□□□□□ -1.54
VPS4YPR173C YBL010CP32788 280 aa5.45□□□□□ -1.54
VPS4YPR173C DOA1P36037 715 aa5.45□□□□□ -1.54
VPS4YPR173C APD1P38281 316 aa5.45□□□□□ -1.54
VPS4YPR173C YPC1P38298 316 aa5.45□□□□□ -1.54
VPS4YPR173C SEN34P39707 275 aa5.45□□□□□ -1.54
VPS4YPR173C RMD6P39975 231 aa5.45□□□□□ -1.54
VPS4YPR173C YJR111CP47148 283 aaKnown RBP5.45□□□□□ -1.54
VPS4YPR173C YJR120WP47157 116 aa5.45□□□□□ -1.54
VPS4YPR173C BUL1P48524 976 aa5.45□□□□□ -1.54
VPS4YPR173C FOL2P51601 243 aaKnown RBP5.45□□□□□ -1.54
VPS4YPR173C RSM27P53305 110 aa5.45□□□□□ -1.54
VPS4YPR173C ALG12P53730 551 aa5.45□□□□□ -1.54
VPS4YPR173C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.45□□□□□ -1.54not detected
VPS4YPR173C RBS1Q05672 457 aaKnown RBP5.45□□□□□ -1.54
VPS4YPR173C SNT309Q06091 175 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms