RNA–Protein interactions for RNA: YOR205C

GEP3, Transcript of Protein required for mitochondrial ribosome small subunit biogenesis, yeast

Gene GEP3, Length 1,671 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GEP3	YOR205C	CTS2	Q06350	511 aa		4.81	□□□□□ -1.64
GEP3	YOR205C	MIM1	Q08176	113 aa		4.81	□□□□□ -1.64
GEP3	YOR205C	YPL199C	Q08954	240 aa		4.81	□□□□□ -1.64
GEP3	YOR205C	NIP7	Q08962	181 aa	Known RBP	4.81	□□□□□ -1.64
GEP3	YOR205C	TIR4	Q12218	487 aa	Predicted RBP	4.81	□□□□□ -1.64
GEP3	YOR205C	YRM1	Q12340	786 aa		4.81	□□□□□ -1.64
GEP3	YOR205C	HMS1	Q12398	434 aa		4.81	□□□□□ -1.64
GEP3	YOR205C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
GEP3	YOR205C	CYR1	P08678	2026 aa	Known RBP	4.81	□□□□□ -1.64
GEP3	YOR205C	CAP2	P13517	287 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	STE18	P18852	110 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	CAM1	P29547	415 aa	Known RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	HOM6	P31116	359 aa	Known RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	MCM10	P32354	571 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	PAU2	P32612	120 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	SEC66	P33754	206 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	ZRT3	P34240	503 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	YHK8	P38776	514 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	MIT1	P40002	666 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	RFC4	P40339	323 aa	Known RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	PAM16	P42949	149 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	PBP1	P53297	722 aa	Known RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	YKR005C	Q02203	525 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	SSY1	Q03770	852 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	RVB1	Q03940	463 aa	Known RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	VBA4	Q04602	768 aa	Known RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	PEX10	Q05568	337 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	RRP15	Q06511	250 aa	Predicted RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	YPL278C	Q08990	100 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	RRI1	Q12468	440 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	CYT1	P07143	309 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	RPS18A	P0CX55	146 aa	Known RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	RPS18B	P0CX56	146 aa	Predicted RBP	4.8	□□□□□ -1.64
GEP3	YOR205C	CTA1	P15202	515 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	MDH2	P22133	377 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	THI4	P32318	326 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	PDR3	P33200	976 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	SFK1	P35735	353 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	COS9	P36034	407 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	CCZ1	P38273	704 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	PEX32	P38292	413 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	SLZ1	P40167	298 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	AIM20	P40451	204 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	MNN5	P46982	586 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	RPA14	P50106	137 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	IMO32	P53219	342 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	MTM1	P53320	366 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	ATG4	P53867	494 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	RCN2	Q12044	265 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	Q0144	Q9ZZW2	109 aa		4.8	□□□□□ -1.64
GEP3	YOR205C	SOD2	P00447	233 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	CDC9	P04819	755 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	OPI3	P05375	206 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	RPL7A	P05737	244 aa	Known RBP	4.79	□□□□□ -1.64
GEP3	YOR205C	ADK1	P07170	222 aa	Known RBP	4.79	□□□□□ -1.64
GEP3	YOR205C	PDA1	P16387	420 aa	Known RBP	4.79	□□□□□ -1.64
GEP3	YOR205C	MEK1	P24719	497 aa	Predicted RBP	4.79	□□□□□ -1.64
GEP3	YOR205C	PTC6	P25646	442 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	TIR3	P40552	269 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	AAD14	P42884	376 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	SLS1	P42900	643 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	DPB11	P47027	764 aa	Predicted RBP	4.79	□□□□□ -1.64
GEP3	YOR205C	IRC18	P47056	224 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	DOC1	P53068	250 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	MRH4	P53166	561 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	ASI3	P53983	676 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	PET191	Q02772	108 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	KAP120	Q02932	1032 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	DIG2	Q03373	323 aa	Known RBP	4.79	□□□□□ -1.64
GEP3	YOR205C	YDR102C	Q03864	110 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	YMR130W	Q04223	302 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	HLR1	Q04429	423 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	RPL7B	Q12213	244 aa	Known RBP	4.79	□□□□□ -1.64
GEP3	YOR205C	RTN2	Q12443	393 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	YHR214C-E	Q8TGK0	99 aa		4.79	□□□□□ -1.64
GEP3	YOR205C	BRR2	P32639	2163 aa	Known RBP	4.78	□□□□□ -1.64
GEP3	YOR205C	SCEI	P03882	235 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	HIS3	P06633	220 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	NAM2	P11325	894 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	DBF2	P22204	572 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	PUP1	P25043	261 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	NFS1	P25374	497 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	ATS1	P31386	333 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	SPT14	P32363	452 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	RIB7	P33312	244 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	RPS26A	P39938	119 aa	Known RBP	4.78	□□□□□ -1.64
GEP3	YOR205C	RPS26B	P39939	119 aa	Known RBP	4.78	□□□□□ -1.64
GEP3	YOR205C	DLS1	P40366	167 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	YJR120W	P47157	116 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	YGL204C	P53089	101 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	RMD9	P53140	646 aa	Known RBP	4.78	□□□□□ -1.64
GEP3	YOR205C	SLI1	P53304	468 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	ERV29	P53337	310 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	SAM50	P53969	484 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	SUR7	P54003	302 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	YLR152C	P54072	576 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	MSS11	Q03825	758 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	AGE1	Q04412	482 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	ERF2	Q06551	359 aa		4.78	□□□□□ -1.64
GEP3	YOR205C	SSK1	Q07084	712 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 85.6 ms