RNA–Protein interactions for RNA: YNL079C

TPM1, Transcript of Major isoform of tropomyosin, yeast

Gene TPM1, Length 600 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TPM1	YNL079C	POL30	P15873	258 aa	Known RBP	3.19	□□□□□ -1.9
TPM1	YNL079C	GRR1	P24814	1151 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	TIP1	P27654	210 aa	Predicted RBP	3.19	□□□□□ -1.9
TPM1	YNL079C	MRPL6	P32904	214 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	KKQ8	P36004	724 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	NAT2	P37293	288 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	ECM8	P38246	354 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	APE4	P38821	490 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	EGD2	P38879	174 aa	Known RBP	3.19	□□□□□ -1.9
TPM1	YNL079C	AVT6	P40074	448 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	MPM1	P40364	252 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	PMT4	P46971	762 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	SED5	Q01590	340 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	RRN5	Q02983	363 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	TLG1	Q03322	224 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	RSN1	Q03516	953 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	ATG38	Q05789	226 aa	Known RBP	3.19	□□□□□ -1.9
TPM1	YNL079C	PLB3	Q08108	686 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	RRT8	Q08219	342 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	THP3	Q12049	470 aa	Known RBP	3.19	□□□□□ -1.9
TPM1	YNL079C	ISA2	Q12425	185 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	YER078W-A	Q3E7A2	54 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	RIB3	Q99258	208 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	MED11	Q99278	115 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	UBR1	P19812	1950 aa		3.19	□□□□□ -1.9
TPM1	YNL079C	SCEI	P03882	235 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	SPT15	P13393	240 aa	Known RBP	3.18	□□□□□ -1.9
TPM1	YNL079C	CBS2	P14905	389 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	ITR1	P30605	584 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	VMA6	P32366	345 aa	Known RBP	3.18	□□□□□ -1.9
TPM1	YNL079C	YKL097C	P34245	136 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	SOR1	P35497	357 aa	Known RBP	3.18	□□□□□ -1.9
TPM1	YNL079C	MIX23	P38162	196 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	STP2	P38704	541 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	LYS1	P38998	373 aa	RIP-Chip data	3.18	□□□□□ -1.9	not detected
TPM1	YNL079C	MST28	P39552	234 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	APQ12	P40532	138 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	ZIM17	P42844	174 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	SSN8	P47821	323 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	BIO3	P50277	480 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	SHE4	P51534	789 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	SDT1	P53078	280 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	YNR048W	P53740	393 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	SRL4	Q03085	281 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	YMR130W	Q04223	302 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	APC4	Q04601	652 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	SOR2	Q07786	357 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	TIM18	Q08749	192 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	SAM4	Q08985	325 aa	Known RBP	3.18	□□□□□ -1.9
TPM1	YNL079C	MSH5	Q12175	901 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	GLE1	Q12315	538 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	ORT1	Q12375	292 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	MHF1	Q3E835	90 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	MSB2	P32334	1306 aa		3.18	□□□□□ -1.9
TPM1	YNL079C	MDM35	O60200	86 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	MER1	P16523	270 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	CPR2	P23285	205 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	SSO1	P32867	290 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	GDH2	P33327	1092 aa	Known RBP	3.17	□□□□□ -1.9
TPM1	YNL079C	UTP11	P34247	250 aa	Predicted RBP	3.17	□□□□□ -1.9
TPM1	YNL079C	MRPL37	P36532	105 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	RRN10	P38204	145 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	DED81	P38707	554 aa	Known RBP	3.17	□□□□□ -1.9
TPM1	YNL079C	IPT1	P38954	527 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	SOP4	P39543	234 aa	Predicted RBP	3.17	□□□□□ -1.9
TPM1	YNL079C	KRE29	P40026	464 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	SPO73	P40031	143 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	PRM10	P42946	383 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	YFL067W	P43537	175 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	HMS2	P47175	358 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	RBL2	P48606	106 aa	Known RBP	3.17	□□□□□ -1.9
TPM1	YNL079C	COG5	P53951	403 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	OAZ1	Q02803	292 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	YPL107W	Q02873	248 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	YPL113C	Q02961	396 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	TRM82	Q03774	444 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	SCW10	Q04951	389 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	SPO77	Q06134	477 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	YLR036C	Q07986	203 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	REX4	Q08237	289 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	YLR126C	Q12288	251 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	SFM1	Q12314	213 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	RRP12	Q12754	1228 aa	Known RBP	3.17	□□□□□ -1.9
TPM1	YNL079C	YPL119C-A	Q3E751	87 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	YDR034W-B	Q6Q5X2	51 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	NAG1	Q8TGN9	163 aa		3.17	□□□□□ -1.9
TPM1	YNL079C	ILV5	P06168	395 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	STE7	P06784	515 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	DBP3	P20447	523 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	SCL1	P21243	252 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	RPS1B	P23248	255 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	LSB5	P25369	354 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	ADE1	P27616	306 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	ITR2	P30606	609 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	MEI5	P32489	222 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	VMA8	P32610	256 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	LHP1	P33399	275 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	ASC1	P38011	319 aa	Known RBP	3.16	□□□□□ -1.9
TPM1	YNL079C	RIB5	P38145	238 aa		3.16	□□□□□ -1.9
TPM1	YNL079C	AVT5	P38176	459 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms