RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C YFL064CP43540 174 aa3.7□□□□□ -1.82
CTF18YMR078C YPL113CQ02961 396 aa3.7□□□□□ -1.82
CTF18YMR078C ARV1Q06541 321 aa3.7□□□□□ -1.82
CTF18YMR078C RPP0P05317 312 aaKnown RBP3.69□□□□□ -1.82
CTF18YMR078C AIM29P36154 155 aa3.69□□□□□ -1.82
CTF18YMR078C ATG12P38316 186 aa3.69□□□□□ -1.82
CTF18YMR078C YIL054WP40524 105 aa3.69□□□□□ -1.82
CTF18YMR078C EMC2P47133 292 aaKnown RBP3.69□□□□□ -1.82
CTF18YMR078C IBA57P47158 497 aa3.69□□□□□ -1.82
CTF18YMR078C CAX4P53223 239 aa3.69□□□□□ -1.82
CTF18YMR078C CPD1P53314 239 aa3.69□□□□□ -1.82
CTF18YMR078C IES4Q08561 116 aa3.69□□□□□ -1.82
CTF18YMR078C MRPL6P32904 214 aa3.68□□□□□ -1.82
CTF18YMR078C PRY2P36110 329 aa3.68□□□□□ -1.82
CTF18YMR078C YIA6P40556 373 aa3.68□□□□□ -1.82
CTF18YMR078C SUA5P32579 426 aa3.68□□□□□ -1.82
CTF18YMR078C MRPL3P36516 390 aa3.68□□□□□ -1.82
CTF18YMR078C TDA11P38854 504 aa3.68□□□□□ -1.82
CTF18YMR078C EDC2P40023 145 aaPredicted RBP3.68□□□□□ -1.82
CTF18YMR078C MRX5P47007 382 aa3.68□□□□□ -1.82
CTF18YMR078C COX2P00410 251 aa3.67□□□□□ -1.82
CTF18YMR078C AVT7P40501 490 aa3.67□□□□□ -1.82
CTF18YMR078C YIL012WP40551 113 aa3.67□□□□□ -1.82
CTF18YMR078C UFD1P53044 361 aa3.67□□□□□ -1.82
CTF18YMR078C LIF1P53150 421 aa3.67□□□□□ -1.82
CTF18YMR078C YML018CQ03730 393 aa3.67□□□□□ -1.82
CTF18YMR078C RRT8Q08219 342 aa3.67□□□□□ -1.82
CTF18YMR078C POF1P25576 258 aa3.67□□□□□ -1.82
CTF18YMR078C TPS2P31688 896 aaKnown RBP3.67□□□□□ -1.82
CTF18YMR078C PET100P38958 111 aa3.67□□□□□ -1.82
CTF18YMR078C COA1P40452 197 aa3.67□□□□□ -1.82
CTF18YMR078C YMR209CQ03648 457 aa3.67□□□□□ -1.82
CTF18YMR078C CUP2P15315 225 aa3.66□□□□□ -1.82
CTF18YMR078C PEX31P53203 462 aa3.66□□□□□ -1.82
CTF18YMR078C ZRG17P53735 605 aa3.66□□□□□ -1.82
CTF18YMR078C COX20Q04935 205 aa3.66□□□□□ -1.82
CTF18YMR078C YPL264CQ08980 353 aa3.66□□□□□ -1.82
CTF18YMR078C POL30P15873 258 aaKnown RBP3.66□□□□□ -1.82
CTF18YMR078C MPP6P53725 186 aaPredicted RBP3.66□□□□□ -1.82
CTF18YMR078C GMC2Q06201 188 aa3.66□□□□□ -1.82
CTF18YMR078C SSK22P25390 1331 aaPredicted RBP3.65□□□□□ -1.83
CTF18YMR078C RPS3P05750 240 aaKnown RBP3.65□□□□□ -1.83
CTF18YMR078C IMP1P28627 190 aa3.65□□□□□ -1.83
CTF18YMR078C YAR1P46683 200 aa3.65□□□□□ -1.83
CTF18YMR078C YJL118WP47022 219 aa3.65□□□□□ -1.83
CTF18YMR078C PRP24P49960 444 aaKnown RBP3.65□□□□□ -1.83
CTF18YMR078C KAP114P53067 1004 aa3.65□□□□□ -1.83
CTF18YMR078C YDR222WQ04925 415 aa3.65□□□□□ -1.83
CTF18YMR078C PRE7P23724 241 aaKnown RBP3.64□□□□□ -1.83
CTF18YMR078C NPT1P39683 429 aaKnown RBP3.64□□□□□ -1.83
CTF18YMR078C SER33P40510 469 aa3.64□□□□□ -1.83
CTF18YMR078C TAF9Q05027 157 aa3.64□□□□□ -1.83
CTF18YMR078C SFH1Q06168 426 aa3.64□□□□□ -1.83
CTF18YMR078C AGA2P32781 87 aa3.64□□□□□ -1.83
CTF18YMR078C PRM9P39551 298 aa3.64□□□□□ -1.83
CTF18YMR078C SEN34P39707 275 aa3.64□□□□□ -1.83
CTF18YMR078C COS4P43542 379 aa3.64□□□□□ -1.83
CTF18YMR078C VPS60Q03390 229 aa3.64□□□□□ -1.83
CTF18YMR078C GTO3Q04806 366 aa3.64□□□□□ -1.83
CTF18YMR078C ARC18Q05933 178 aaKnown RBP3.64□□□□□ -1.83
CTF18YMR078C MET16P18408 261 aaPredicted RBP3.63□□□□□ -1.83
CTF18YMR078C KRE29P40026 464 aa3.63□□□□□ -1.83
CTF18YMR078C ASG7P46993 209 aa3.63□□□□□ -1.83
CTF18YMR078C MRS2Q01926 470 aa3.63□□□□□ -1.83
CTF18YMR078C TRM44Q02648 567 aaKnown RBP3.63□□□□□ -1.83
CTF18YMR078C YDL144CQ07589 356 aa3.63□□□□□ -1.83
CTF18YMR078C RPL24AP04449 155 aaKnown RBP3.63□□□□□ -1.83
CTF18YMR078C ARO4P32449 370 aaKnown RBP3.63□□□□□ -1.83
CTF18YMR078C HSM3P38348 480 aa3.63□□□□□ -1.83
CTF18YMR078C SDC1Q03323 175 aa3.63□□□□□ -1.83
CTF18YMR078C YUH1P35127 236 aa3.62□□□□□ -1.83
CTF18YMR078C OSH6Q02201 448 aa3.62□□□□□ -1.83
CTF18YMR078C SKI2P35207 1287 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
CTF18YMR078C YBL081WP38180 368 aaKnown RBP3.62□□□□□ -1.83
CTF18YMR078C YHL044WP38727 235 aa3.62□□□□□ -1.83
CTF18YMR078C SYS1P41544 203 aa3.62□□□□□ -1.83
CTF18YMR078C PFS2P42841 465 aaKnown RBP3.62□□□□□ -1.83
CTF18YMR078C PHO80P20052 293 aa3.61□□□□□ -1.83
CTF18YMR078C COT1P32798 439 aa3.61□□□□□ -1.83
CTF18YMR078C CSE1P33307 960 aa3.61□□□□□ -1.83
CTF18YMR078C POP8P38208 133 aa3.61□□□□□ -1.83
CTF18YMR078C NBP35P52920 328 aa3.61□□□□□ -1.83
CTF18YMR078C FMP41P53889 259 aaKnown RBP3.61□□□□□ -1.83
CTF18YMR078C SWS2P53937 143 aa3.61□□□□□ -1.83
CTF18YMR078C OST6Q03723 332 aa3.61□□□□□ -1.83
CTF18YMR078C MSF1P08425 469 aa3.6□□□□□ -1.83
CTF18YMR078C MNT4P53745 580 aa3.6□□□□□ -1.83
CTF18YMR078C YAL064W-BO13512 126 aa3.6□□□□□ -1.83
CTF18YMR078C SEC10Q06245 871 aa3.6□□□□□ -1.83
CTF18YMR078C ATG5Q12380 294 aa3.6□□□□□ -1.83
CTF18YMR078C TAD2P47058 250 aa3.59□□□□□ -1.83
CTF18YMR078C CPR7P47103 393 aa3.59□□□□□ -1.83
CTF18YMR078C SGT2Q12118 346 aaKnown RBP3.59□□□□□ -1.83
CTF18YMR078C FMT1P32785 401 aa3.59□□□□□ -1.84
CTF18YMR078C AVT6P40074 448 aa3.59□□□□□ -1.84
CTF18YMR078C NBP1P52919 319 aaPredicted RBP3.59□□□□□ -1.84
CTF18YMR078C COG7P53195 279 aa3.59□□□□□ -1.84
CTF18YMR078C CTS2Q06350 511 aa3.59□□□□□ -1.84
CTF18YMR078C RPS23AP0CX29 145 aaKnown RBP3.58□□□□□ -1.84
CTF18YMR078C RPS23BP0CX30 145 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 70.7 ms