RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C FRE3Q08905 711 aa5.33□□□□□ -1.56
SSK1YLR006C RRP42Q12277 265 aaPredicted RBP5.33□□□□□ -1.56
SSK1YLR006C GLO4Q12320 285 aa5.33□□□□□ -1.56
SSK1YLR006C PRP46Q12417 451 aaPredicted RBP5.33□□□□□ -1.56
SSK1YLR006C UBA3Q99344 299 aa5.33□□□□□ -1.56
SSK1YLR006C KIN28P06242 306 aa5.33□□□□□ -1.56
SSK1YLR006C PDE2P06776 526 aa5.33□□□□□ -1.56
SSK1YLR006C MET2P08465 486 aa5.33□□□□□ -1.56
SSK1YLR006C CAM1P29547 415 aaKnown RBP5.33□□□□□ -1.56
SSK1YLR006C FUN26P31381 517 aa5.33□□□□□ -1.56
SSK1YLR006C SPT14P32363 452 aa5.33□□□□□ -1.56
SSK1YLR006C TOD6P34219 525 aa5.33□□□□□ -1.56
SSK1YLR006C ZRT3P34240 503 aa5.33□□□□□ -1.56
SSK1YLR006C ELF1P36053 145 aa5.33□□□□□ -1.56
SSK1YLR006C PRS2P38620 318 aaKnown RBP5.33□□□□□ -1.56
SSK1YLR006C PTC7P38797 343 aa5.33□□□□□ -1.56
SSK1YLR006C BDH1P39714 382 aa5.33□□□□□ -1.56
SSK1YLR006C YEL073CP39974 107 aa5.33□□□□□ -1.56
SSK1YLR006C ISC1P40015 477 aaKnown RBP5.33□□□□□ -1.56
SSK1YLR006C YNL194CP40169 301 aa5.33□□□□□ -1.56
SSK1YLR006C PAC11P40960 533 aa5.33□□□□□ -1.56
SSK1YLR006C MRH4P53166 561 aa5.33□□□□□ -1.56
SSK1YLR006C IMO32P53219 342 aa5.33□□□□□ -1.56
SSK1YLR006C APM1Q00776 475 aaPredicted RBP5.33□□□□□ -1.56
SSK1YLR006C REC102Q02721 264 aa5.33□□□□□ -1.56
SSK1YLR006C YPQ1Q12010 308 aa5.33□□□□□ -1.56
SSK1YLR006C SUS1Q6WNK7 96 aa5.33□□□□□ -1.56
SSK1YLR006C YBR298C-AQ8TGK4 73 aa5.33□□□□□ -1.56
SSK1YLR006C MES1P00958 751 aaKnown RBP5.32□□□□□ -1.56
SSK1YLR006C MOD5P07884 428 aa5.32□□□□□ -1.56
SSK1YLR006C PET9P18239 318 aaKnown RBP5.32□□□□□ -1.56
SSK1YLR006C PPH22P23595 377 aa5.32□□□□□ -1.56
SSK1YLR006C CAT2P32796 670 aaKnown RBP5.32□□□□□ -1.56
SSK1YLR006C LHP1P33399 275 aaKnown RBP5.32□□□□□ -1.56
SSK1YLR006C CBP4P37267 147 aa5.32□□□□□ -1.56
SSK1YLR006C EHT1P38295 451 aa5.32□□□□□ -1.56
SSK1YLR006C PLB1P39105 664 aa5.32□□□□□ -1.56
SSK1YLR006C PMT6P42934 759 aa5.32□□□□□ -1.56
SSK1YLR006C YJL043WP47053 257 aa5.32□□□□□ -1.56
SSK1YLR006C SPT20P50875 604 aa5.32□□□□□ -1.56
SSK1YLR006C EMC4P53073 190 aa5.32□□□□□ -1.56
SSK1YLR006C IGO1P53897 168 aa5.32□□□□□ -1.56
SSK1YLR006C CCE1Q03702 353 aa5.32□□□□□ -1.56
SSK1YLR006C RRP45Q05636 305 aaKnown RBP5.32□□□□□ -1.56
SSK1YLR006C CRR1Q05790 422 aa5.32□□□□□ -1.56
SSK1YLR006C STT4P37297 1900 aa5.32□□□□□ -1.56
SSK1YLR006C COX3P00420 269 aa5.32□□□□□ -1.56
SSK1YLR006C HTB1P02293 131 aaKnown RBP5.32□□□□□ -1.56
SSK1YLR006C HTB2P02294 131 aa5.32□□□□□ -1.56
SSK1YLR006C CBP6P07253 162 aaPredicted RBP5.32□□□□□ -1.56
SSK1YLR006C NDC1P32500 655 aa5.32□□□□□ -1.56
SSK1YLR006C PDR3P33200 976 aa5.32□□□□□ -1.56
SSK1YLR006C VMA7P39111 118 aa5.32□□□□□ -1.56
SSK1YLR006C SCW11P53189 542 aa5.32□□□□□ -1.56
SSK1YLR006C YGR015CP53208 328 aa5.32□□□□□ -1.56
SSK1YLR006C AAT1Q01802 451 aa5.32□□□□□ -1.56
SSK1YLR006C AKR2Q12013 749 aa5.32□□□□□ -1.56
SSK1YLR006C SIA1Q12212 622 aa5.32□□□□□ -1.56
SSK1YLR006C GTT2Q12390 233 aa5.32□□□□□ -1.56
SSK1YLR006C Q0144Q9ZZW2 109 aa5.32□□□□□ -1.56
SSK1YLR006C TRP4P07285 380 aaPredicted RBP5.31□□□□□ -1.56
SSK1YLR006C HXT2P23585 541 aa5.31□□□□□ -1.56
SSK1YLR006C CDC13P32797 924 aaKnown RBP5.31□□□□□ -1.56
SSK1YLR006C SOL2P37262 315 aa5.31□□□□□ -1.56
SSK1YLR006C DER1P38307 211 aa5.31□□□□□ -1.56
SSK1YLR006C MDM31P38880 579 aa5.31□□□□□ -1.56
SSK1YLR006C YHR210CP38893 341 aa5.31□□□□□ -1.56
SSK1YLR006C BAP3P41815 604 aa5.31□□□□□ -1.56
SSK1YLR006C YGR201CP42936 225 aa5.31□□□□□ -1.56
SSK1YLR006C MDM34P53083 459 aa5.31□□□□□ -1.56
SSK1YLR006C MTL1P53214 551 aa5.31□□□□□ -1.56
SSK1YLR006C ATG4P53867 494 aa5.31□□□□□ -1.56
SSK1YLR006C ARG5,6Q01217 863 aa5.31□□□□□ -1.56
SSK1YLR006C ATG21Q02887 496 aa5.31□□□□□ -1.56
SSK1YLR006C GIP3Q03016 1276 aa5.31□□□□□ -1.56
SSK1YLR006C YMR034CQ05131 434 aaPredicted RBP5.31□□□□□ -1.56
SSK1YLR006C OPT2Q06593 877 aa5.31□□□□□ -1.56
SSK1YLR006C YPL199CQ08954 240 aa5.31□□□□□ -1.56
SSK1YLR006C MDM32Q12171 622 aa5.31□□□□□ -1.56
SSK1YLR006C YPR1Q12458 312 aa5.31□□□□□ -1.56
SSK1YLR006C YCL001W-BQ96VH2 84 aa5.31□□□□□ -1.56
SSK1YLR006C DIF1O13577 133 aa5.3□□□□□ -1.56
SSK1YLR006C HTS1P07263 546 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C GPI12P23797 304 aa5.3□□□□□ -1.56
SSK1YLR006C YIM1P28625 365 aa5.3□□□□□ -1.56
SSK1YLR006C ERG9P29704 444 aa5.3□□□□□ -1.56
SSK1YLR006C MDH3P32419 343 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
SSK1YLR006C FLO10P36170 1169 aa5.3□□□□□ -1.56
SSK1YLR006C ICS2P38284 255 aa5.3□□□□□ -1.56
SSK1YLR006C STP2P38704 541 aa5.3□□□□□ -1.56
SSK1YLR006C YHR035WP38769 630 aa5.3□□□□□ -1.56
SSK1YLR006C YHR122WP38829 231 aa5.3□□□□□ -1.56
SSK1YLR006C GDS1P41913 522 aa5.3□□□□□ -1.56
SSK1YLR006C HMS2P47175 358 aa5.3□□□□□ -1.56
SSK1YLR006C RPS12P48589 143 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C NIF3P53081 288 aa5.3□□□□□ -1.56
SSK1YLR006C YGR035CP53222 116 aa5.3□□□□□ -1.56
SSK1YLR006C YLR460CP54007 376 aa5.3□□□□□ -1.56
SSK1YLR006C TPS1Q00764 495 aaKnown RBP5.3□□□□□ -1.56
SSK1YLR006C PFA5Q03289 374 aa5.3□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms