RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W YER084WP40057 128 aa3.34□□□□□ -1.88
SSL1YLR005W IES5P40060 125 aa3.34□□□□□ -1.88
SSL1YLR005W MDE1P47095 244 aa3.34□□□□□ -1.88
SSL1YLR005W TOS2P50078 622 aa3.34□□□□□ -1.88
SSL1YLR005W MPC1P53157 130 aaKnown RBP3.34□□□□□ -1.88
SSL1YLR005W CRZ1P53968 678 aa3.34□□□□□ -1.88
SSL1YLR005W SEC13Q04491 297 aaKnown RBP3.34□□□□□ -1.88
SSL1YLR005W YPR127WQ06494 345 aa3.34□□□□□ -1.88
SSL1YLR005W TAZ1Q06510 381 aa3.34□□□□□ -1.88
SSL1YLR005W MLC2Q06580 163 aa3.34□□□□□ -1.88
SSL1YLR005W YOL114CQ12322 202 aa3.34□□□□□ -1.88
SSL1YLR005W YER145C-AA0A023PYF4 145 aa3.33□□□□□ -1.88
SSL1YLR005W YOL163WP0CF20 169 aa3.33□□□□□ -1.88
SSL1YLR005W UGA1P17649 471 aa3.33□□□□□ -1.88
SSL1YLR005W DAL80P26343 269 aa3.33□□□□□ -1.88
SSL1YLR005W MCM10P32354 571 aa3.33□□□□□ -1.88
SSL1YLR005W TOA1P32773 286 aa3.33□□□□□ -1.88
SSL1YLR005W TIM12P32830 109 aa3.33□□□□□ -1.88
SSL1YLR005W MDL1P33310 695 aa3.33□□□□□ -1.88
SSL1YLR005W ECM15P35195 104 aa3.33□□□□□ -1.88
SSL1YLR005W COS9P36034 407 aa3.33□□□□□ -1.88
SSL1YLR005W HOT13P36078 116 aa3.33□□□□□ -1.88
SSL1YLR005W YER184CP39961 794 aa3.33□□□□□ -1.88
SSL1YLR005W KRE29P40026 464 aa3.33□□□□□ -1.88
SSL1YLR005W GCN20P43535 752 aaKnown RBP3.33□□□□□ -1.88
SSL1YLR005W IDS2P46958 469 aa3.33□□□□□ -1.88
SSL1YLR005W SHE4P51534 789 aa3.33□□□□□ -1.88
SSL1YLR005W ASI1P54074 624 aa3.33□□□□□ -1.88
SSL1YLR005W SKO1Q02100 647 aa3.33□□□□□ -1.88
SSL1YLR005W GMC1Q04399 608 aa3.33□□□□□ -1.88
SSL1YLR005W CRT10Q08226 957 aa3.33□□□□□ -1.88
SSL1YLR005W THP1Q08231 455 aa3.33□□□□□ -1.88
SSL1YLR005W MED2Q12124 431 aa3.33□□□□□ -1.88
SSL1YLR005W YOR343CQ12484 108 aa3.33□□□□□ -1.88
SSL1YLR005W MSS18P08593 268 aa3.32□□□□□ -1.88
SSL1YLR005W ARO3P14843 370 aaKnown RBP3.32□□□□□ -1.88
SSL1YLR005W YPK2P18961 677 aa3.32□□□□□ -1.88
SSL1YLR005W POL4P25615 582 aa3.32□□□□□ -1.88
SSL1YLR005W RPS5P26783 225 aaKnown RBP3.32□□□□□ -1.88
SSL1YLR005W PRE4P30657 266 aa3.32□□□□□ -1.88
SSL1YLR005W MDH3P32419 343 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
SSL1YLR005W MNS1P32906 549 aa3.32□□□□□ -1.88
SSL1YLR005W CLB6P32943 380 aa3.32□□□□□ -1.88
SSL1YLR005W ECM14P38836 430 aa3.32□□□□□ -1.88
SSL1YLR005W MTW1P39731 289 aa3.32□□□□□ -1.88
SSL1YLR005W YER121WP40076 114 aa3.32□□□□□ -1.88
SSL1YLR005W YIL029CP40538 142 aa3.32□□□□□ -1.88
SSL1YLR005W YIR020CP40575 100 aa3.32□□□□□ -1.88
SSL1YLR005W EGT2P42835 1041 aa3.32□□□□□ -1.88
SSL1YLR005W QRI7P43122 407 aa3.32□□□□□ -1.88
SSL1YLR005W TRS85P46944 698 aa3.32□□□□□ -1.88
SSL1YLR005W NCA3P46955 337 aa3.32□□□□□ -1.88
SSL1YLR005W DPB11P47027 764 aaPredicted RBP3.32□□□□□ -1.88
SSL1YLR005W YIP4P53093 235 aa3.32□□□□□ -1.88
SSL1YLR005W MTM1P53320 366 aa3.32□□□□□ -1.88
SSL1YLR005W CPR8P53728 308 aa3.32□□□□□ -1.88
SSL1YLR005W YNL181WP53878 407 aa3.32□□□□□ -1.88
SSL1YLR005W SED1Q01589 338 aa3.32□□□□□ -1.88
SSL1YLR005W DYN3Q04949 312 aa3.32□□□□□ -1.88
SSL1YLR005W SFH1Q06168 426 aa3.32□□□□□ -1.88
SSL1YLR005W MUM3Q08750 479 aa3.32□□□□□ -1.88
SSL1YLR005W BTS1Q12051 335 aa3.32□□□□□ -1.88
SSL1YLR005W RDL1Q12305 139 aaKnown RBP3.32□□□□□ -1.88
SSL1YLR005W YDL199CQ12407 687 aa3.32□□□□□ -1.88
SSL1YLR005W IZH2Q12442 317 aa3.32□□□□□ -1.88
SSL1YLR005W MRX4Q12467 430 aa3.32□□□□□ -1.88
SSL1YLR005W YHR214C-EQ8TGK0 99 aa3.32□□□□□ -1.88
SSL1YLR005W FSH3Q99369 266 aa3.32□□□□□ -1.88
SSL1YLR005W RAD7P06779 565 aa3.31□□□□□ -1.88
SSL1YLR005W CDC10P25342 322 aaKnown RBP3.31□□□□□ -1.88
SSL1YLR005W GIT1P25346 518 aa3.31□□□□□ -1.88
SSL1YLR005W PRE2P30656 287 aaKnown RBP3.31□□□□□ -1.88
SSL1YLR005W DGR2P32330 852 aa3.31□□□□□ -1.88
SSL1YLR005W ARP2P32381 391 aaKnown RBP3.31□□□□□ -1.88
SSL1YLR005W YKL102CP34249 101 aa3.31□□□□□ -1.88
SSL1YLR005W CDS1P38221 457 aa3.31□□□□□ -1.88
SSL1YLR005W MLH1P38920 769 aa3.31□□□□□ -1.88
SSL1YLR005W YEL068CP39977 110 aa3.31□□□□□ -1.88
SSL1YLR005W CAK1P43568 368 aaPredicted RBP3.31□□□□□ -1.88
SSL1YLR005W IMD4P50094 524 aaKnown RBP3.31□□□□□ -1.88
SSL1YLR005W UBC13P52490 153 aa3.31□□□□□ -1.88
SSL1YLR005W YGL235WP53071 178 aa3.31□□□□□ -1.88
SSL1YLR005W YNL046WP53956 172 aa3.31□□□□□ -1.88
SSL1YLR005W MRP51Q02950 344 aa3.31□□□□□ -1.88
SSL1YLR005W PRM15Q03262 622 aa3.31□□□□□ -1.88
SSL1YLR005W YDR387CQ04162 555 aa3.31□□□□□ -1.88
SSL1YLR005W SNT309Q06091 175 aaPredicted RBP3.31□□□□□ -1.88
SSL1YLR005W YTH1Q06102 208 aaPredicted RBP3.31□□□□□ -1.88
SSL1YLR005W FIT3Q08907 204 aa3.31□□□□□ -1.88
SSL1YLR005W ERP4Q12450 207 aa3.31□□□□□ -1.88
SSL1YLR005W YOL087CQ99247 1116 aa3.31□□□□□ -1.88
SSL1YLR005W YML003WP0CF16 290 aa3.3□□□□□ -1.88
SSL1YLR005W RPS16AP0CX51 143 aaKnown RBP3.3□□□□□ -1.88
SSL1YLR005W RPS16BP0CX52 143 aaKnown RBP3.3□□□□□ -1.88
SSL1YLR005W MSI1P13712 422 aa3.3□□□□□ -1.88
SSL1YLR005W HNM1P19807 563 aa3.3□□□□□ -1.88
SSL1YLR005W RPB8P20436 146 aa3.3□□□□□ -1.88
SSL1YLR005W GFD2P25370 566 aaKnown RBP3.3□□□□□ -1.88
SSL1YLR005W SAC1P32368 623 aaKnown RBP3.3□□□□□ -1.88
SSL1YLR005W SPT10P35208 640 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 108.7 ms