RNA–Protein interactions for RNA: YHR088W

RPF1, Transcript of Protein involved in assembly and export of the large ribosomal subunit, yeastyeast

Gene RPF1, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPF1YHR088W EMC6Q12431 108 aa1.3□□□□□ -2.2
RPF1YHR088W MSS116P15424 664 aaKnown RBP1.29□□□□□ -2.2
RPF1YHR088W RPL16BP26785 198 aaKnown RBP1.29□□□□□ -2.2
RPF1YHR088W VPH1P32563 840 aaKnown RBP1.29□□□□□ -2.2
RPF1YHR088W COY1P34237 679 aa1.29□□□□□ -2.2
RPF1YHR088W GRE3P38715 327 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
RPF1YHR088W UTP25P40498 721 aaKnown RBP1.29□□□□□ -2.2
RPF1YHR088W COS6P53344 381 aa1.29□□□□□ -2.2
RPF1YHR088W SWT21P53873 357 aaPredicted RBP1.29□□□□□ -2.2
RPF1YHR088W EBS1Q03466 884 aaKnown RBP1.29□□□□□ -2.2
RPF1YHR088W IZH4Q99393 312 aa1.29□□□□□ -2.2
RPF1YHR088W NUP157P40064 1391 aaKnown RBP1.29□□□□□ -2.2
RPF1YHR088W PAN1P32521 1480 aa1.29□□□□□ -2.2
RPF1YHR088W TDH1P00360 332 aaKnown RBP1.28□□□□□ -2.2
RPF1YHR088W AEP1P32493 518 aa1.28□□□□□ -2.2
RPF1YHR088W YKL162CP36052 402 aa1.28□□□□□ -2.2
RPF1YHR088W YPC1P38298 316 aa1.28□□□□□ -2.2
RPF1YHR088W TPN1P53099 579 aa1.28□□□□□ -2.2
RPF1YHR088W GRH1Q04410 372 aaKnown RBP1.28□□□□□ -2.2
RPF1YHR088W YOR268CQ08734 132 aa1.28□□□□□ -2.2
RPF1YHR088W ISD11Q6Q560 94 aa1.28□□□□□ -2.2
RPF1YHR088W RAD7P06779 565 aa1.27□□□□□ -2.21
RPF1YHR088W RPL18AP0CX49 186 aaKnown RBP1.27□□□□□ -2.21
RPF1YHR088W RPL18BP0CX50 186 aaKnown RBP1.27□□□□□ -2.21
RPF1YHR088W GAL3P13045 520 aa1.27□□□□□ -2.21
RPF1YHR088W BMH1P29311 267 aaKnown RBP1.27□□□□□ -2.21
RPF1YHR088W YHI9P38765 294 aa1.27□□□□□ -2.21
RPF1YHR088W FCY21P40039 528 aa1.27□□□□□ -2.21
RPF1YHR088W SHQ1P40486 507 aaPredicted RBP1.27□□□□□ -2.21
RPF1YHR088W GDS1P41913 522 aa1.27□□□□□ -2.21
RPF1YHR088W YJL016WP47072 561 aa1.27□□□□□ -2.21
RPF1YHR088W YPT32P51996 222 aaKnown RBP1.27□□□□□ -2.21
RPF1YHR088W COG7P53195 279 aa1.27□□□□□ -2.21
RPF1YHR088W MRS2Q01926 470 aa1.27□□□□□ -2.21
RPF1YHR088W APC9Q12107 265 aa1.27□□□□□ -2.21
RPF1YHR088W NFI1Q12216 726 aa1.27□□□□□ -2.21
RPF1YHR088W YHR086W-AQ3E746 53 aa1.27□□□□□ -2.21
RPF1YHR088W RPL31AP0C2H8 113 aaKnown RBP1.26□□□□□ -2.21
RPF1YHR088W YJL027CP47063 138 aaPredicted RBP1.26□□□□□ -2.21
RPF1YHR088W SLM2P53955 656 aa1.26□□□□□ -2.21
RPF1YHR088W STE23Q06010 1027 aa1.26□□□□□ -2.21
RPF1YHR088W PML1Q07930 204 aaPredicted RBP1.26□□□□□ -2.21
RPF1YHR088W PSY3Q12318 242 aa1.26□□□□□ -2.21
RPF1YHR088W YPR064WQ12492 139 aa1.26□□□□□ -2.21
RPF1YHR088W YEL009C-AA0A023PZF2 135 aa1.25□□□□□ -2.21
RPF1YHR088W TOM40P23644 387 aaKnown RBP1.25□□□□□ -2.21
RPF1YHR088W ERG2P32352 222 aa1.25□□□□□ -2.21
RPF1YHR088W UIP5P36137 443 aa1.25□□□□□ -2.21
RPF1YHR088W YHL026CP38740 315 aa1.25□□□□□ -2.21
RPF1YHR088W RPE1P46969 238 aa1.25□□□□□ -2.21
RPF1YHR088W CAB4P53332 305 aa1.25□□□□□ -2.21
RPF1YHR088W YML018CQ03730 393 aa1.25□□□□□ -2.21
RPF1YHR088W RRP42Q12277 265 aaPredicted RBP1.25□□□□□ -2.21
RPF1YHR088W KRE6P32486 720 aa1.24□□□□□ -2.21
RPF1YHR088W YOR062CP36025 268 aa1.24□□□□□ -2.21
RPF1YHR088W DRE2P36152 348 aa1.24□□□□□ -2.21
RPF1YHR088W PHO89P38361 574 aa1.24□□□□□ -2.21
RPF1YHR088W SEN34P39707 275 aa1.24□□□□□ -2.21
RPF1YHR088W SAM4Q08985 325 aaKnown RBP1.24□□□□□ -2.21
RPF1YHR088W NOT5Q12514 560 aaPredicted RBP1.24□□□□□ -2.21
RPF1YHR088W BOL1Q3E793 110 aa1.24□□□□□ -2.21
RPF1YHR088W SUA5P32579 426 aa1.23□□□□□ -2.21
RPF1YHR088W CAT2P32796 670 aaKnown RBP1.23□□□□□ -2.21
RPF1YHR088W POP8P38208 133 aa1.23□□□□□ -2.21
RPF1YHR088W SPT8P38915 602 aa1.23□□□□□ -2.21
RPF1YHR088W TIF34P40217 347 aaKnown RBP1.23□□□□□ -2.21
RPF1YHR088W AVT7P40501 490 aa1.23□□□□□ -2.21
RPF1YHR088W COX16P47081 118 aa1.23□□□□□ -2.21
RPF1YHR088W YPL150WQ12152 901 aa1.23□□□□□ -2.21
RPF1YHR088W CDC37P06101 506 aaKnown RBP1.22□□□□□ -2.21
RPF1YHR088W RAD10P06838 210 aa1.22□□□□□ -2.21
RPF1YHR088W ATG15P25641 520 aa1.22□□□□□ -2.21
RPF1YHR088W RPL5P26321 297 aaKnown RBP1.22□□□□□ -2.21
RPF1YHR088W COT1P32798 439 aa1.22□□□□□ -2.21
RPF1YHR088W SWC5P38326 303 aa1.22□□□□□ -2.21
RPF1YHR088W NAS2P40555 220 aa1.22□□□□□ -2.21
RPF1YHR088W CDC40P40968 455 aaPredicted RBP1.22□□□□□ -2.21
RPF1YHR088W ECM18Q04623 453 aa1.22□□□□□ -2.21
RPF1YHR088W DPP1Q05521 289 aa1.22□□□□□ -2.21
RPF1YHR088W TAZ1Q06510 381 aa1.22□□□□□ -2.21
RPF1YHR088W PBP4Q07362 185 aaKnown RBP1.22□□□□□ -2.21
RPF1YHR088W YOR114WQ12219 294 aa1.22□□□□□ -2.21
RPF1YHR088W YPR1Q12458 312 aa1.22□□□□□ -2.21
RPF1YHR088W PET18P25362 215 aa1.21□□□□□ -2.22
RPF1YHR088W RPC37P36121 282 aa1.21□□□□□ -2.22
RPF1YHR088W APE4P38821 490 aa1.21□□□□□ -2.22
RPF1YHR088W YPL039WQ03080 316 aa1.21□□□□□ -2.22
RPF1YHR088W SMT3Q12306 101 aaKnown RBP1.21□□□□□ -2.22
RPF1YHR088W YBL112CQ3E7Y4 105 aa1.21□□□□□ -2.22
RPF1YHR088W ATP6P00854 259 aa1.2□□□□□ -2.22
RPF1YHR088W FET3P38993 636 aa1.2□□□□□ -2.22
RPF1YHR088W YJL118WP47022 219 aa1.2□□□□□ -2.22
RPF1YHR088W LOH1P47055 219 aa1.2□□□□□ -2.22
RPF1YHR088W YPL077CQ02831 240 aa1.2□□□□□ -2.22
RPF1YHR088W CAB5Q03941 241 aa1.2□□□□□ -2.22
RPF1YHR088W YMR114CQ04471 368 aaKnown RBP1.2□□□□□ -2.22
RPF1YHR088W PAA1Q12447 191 aaKnown RBP1.2□□□□□ -2.22
RPF1YHR088W PPH21P23594 369 aa1.19□□□□□ -2.22
RPF1YHR088W YCR102CP25608 368 aa1.19□□□□□ -2.22
RPF1YHR088W SFC1P33303 322 aa1.19□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 134.3 ms