RNA–Protein interactions for RNA: YGR195W

SKI6, Transcript of Exosome non-catalytic core component, yeast

Gene SKI6, Length 741 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI6	YGR195W	DFG10	P40526	253 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	YJR079W	P47126	109 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	YJR141W	P47172	347 aa	Predicted RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	MGA1	P53050	456 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	NIF3	P53081	288 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	YNL234W	P53857	426 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	YNL095C	P53932	642 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	ASI3	P53983	676 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	IRC15	Q02733	499 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	SNX41	Q04053	625 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	SEC13	Q04491	297 aa	Known RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	ARC18	Q05933	178 aa	Known RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	GAT3	Q07928	141 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	ATX2	Q12067	313 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	RIO1	Q12196	484 aa	Known RBP	4.61	□□□□□ -1.67
SKI6	YGR195W	YCT1	Q12235	531 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	TUS1	Q06412	1307 aa		4.61	□□□□□ -1.67
SKI6	YGR195W	SSC1	P0CS90	654 aa	Known RBP	4.6	□□□□□ -1.67
SKI6	YGR195W	MTF1	P14908	341 aa	Known RBP	4.6	□□□□□ -1.67
SKI6	YGR195W	SLY1	P22213	666 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	CHA1	P25379	360 aa	Known RBP	4.6	□□□□□ -1.67
SKI6	YGR195W	TIP1	P27654	210 aa	Predicted RBP	4.6	□□□□□ -1.67
SKI6	YGR195W	CAF4	P36130	643 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	GPX2	P38143	162 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	RFT1	P38206	574 aa	Predicted RBP	4.6	□□□□□ -1.67
SKI6	YGR195W	SHC1	P39000	512 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	YIL169C	P40442	995 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	YNL320W	P42840	284 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	SFH5	P47008	294 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	JHD2	P47156	728 aa	Predicted RBP	4.6	□□□□□ -1.67
SKI6	YGR195W	PRP24	P49960	444 aa	Known RBP	4.6	□□□□□ -1.67
SKI6	YGR195W	ODC1	Q03028	310 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	CCE1	Q03702	353 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	YOR114W	Q12219	294 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	YPR064W	Q12492	139 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	SRB8	P25648	1427 aa		4.6	□□□□□ -1.67
SKI6	YGR195W	YLR419W	Q06698	1435 aa	Known RBP	4.6	□□□□□ -1.67
SKI6	YGR195W	TFS1	P14306	219 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	CDC10	P25342	322 aa	Known RBP	4.59	□□□□□ -1.67
SKI6	YGR195W	YCR102C	P25608	368 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	TRR1	P29509	319 aa	Known RBP	4.59	□□□□□ -1.67
SKI6	YGR195W	YKL187C	P34231	750 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	RIB5	P38145	238 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	SDS24	P38314	527 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	YAT2	P40017	923 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	BMT5	P40493	336 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	YKE4	P40544	346 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	PMT4	P46971	762 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	YJL016W	P47072	561 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	IBD2	P53892	351 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	PRM6	Q04705	352 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	MRPL51	Q06090	140 aa	Predicted RBP	4.59	□□□□□ -1.67
SKI6	YGR195W	SFH1	Q06168	426 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	HEM25	Q07534	307 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	YLR012C	Q07927	99 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	YPL199C	Q08954	240 aa		4.59	□□□□□ -1.67
SKI6	YGR195W	SME1	Q12330	94 aa	Predicted RBP	4.59	□□□□□ -1.67
SKI6	YGR195W	WTM1	Q12363	437 aa	Known RBP	4.59	□□□□□ -1.67
SKI6	YGR195W	PUT1	P09368	476 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	RPL20A	P0CX23	172 aa	Known RBP	4.58	□□□□□ -1.68
SKI6	YGR195W	RPL20B	P0CX24	172 aa	Predicted RBP	4.58	□□□□□ -1.68
SKI6	YGR195W	CAP2	P13517	287 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	HEM15	P16622	393 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	SEN2	P16658	377 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	EXG1	P23776	448 aa	Known RBP	4.58	□□□□□ -1.68
SKI6	YGR195W	HOM6	P31116	359 aa	Known RBP	4.58	□□□□□ -1.68
SKI6	YGR195W	QRI5	P32344	111 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	NUF2	P33895	451 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	DBP7	P36120	742 aa	Known RBP	4.58	□□□□□ -1.68
SKI6	YGR195W	NDT80	P38830	627 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	SMB1	P40018	196 aa	Known RBP	4.58	□□□□□ -1.68
SKI6	YGR195W	GDS1	P41913	522 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	YFR057W	P43625	151 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	CIN2	P46670	268 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	VPS25	P47142	202 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	GTR2	P53290	341 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	MTM1	P53320	366 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	YNL140C	P53910	189 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	YMR114C	Q04471	368 aa	Known RBP	4.58	□□□□□ -1.68
SKI6	YGR195W	BNA5	Q05979	453 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	THI20	Q08224	551 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	ESA1	Q08649	445 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	RRS1	Q08746	203 aa	Known RBP	4.58	□□□□□ -1.68
SKI6	YGR195W	DDC1	Q08949	612 aa		4.58	□□□□□ -1.68
SKI6	YGR195W	NTE1	Q04958	1679 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	MHP1	P43638	1398 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	ZWF1	P11412	505 aa	Known RBP	4.57	□□□□□ -1.68
SKI6	YGR195W	CTA1	P15202	515 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	ERD1	P16151	362 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	EHD3	P28817	500 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	DEP1	P31385	405 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	MCH2	P36032	473 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	ANR2	P36090	516 aa	Predicted RBP	4.57	□□□□□ -1.68
SKI6	YGR195W	CHK1	P38147	527 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	DHH1	P39517	506 aa	Known RBP	4.57	□□□□□ -1.68
SKI6	YGR195W	ALG8	P40351	577 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	AGE2	P40529	298 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	NUP57	P48837	541 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	MAL13	P53338	473 aa		4.57	□□□□□ -1.68
SKI6	YGR195W	YMR010W	Q03687	405 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 60.8 ms