RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W TAL1P15019 335 aaKnown RBP1.58□□□□□ -2.16
SHE9YDR393W ACB1P31787 87 aa1.58□□□□□ -2.16
SHE9YDR393W CTM1P38818 585 aa1.58□□□□□ -2.16
SHE9YDR393W ASP1P38986 381 aaPredicted RBP1.58□□□□□ -2.16
SHE9YDR393W TAF6P53040 516 aa1.58□□□□□ -2.16
SHE9YDR393W YGL114WP53134 725 aa1.58□□□□□ -2.16
SHE9YDR393W CUE3P53137 624 aaKnown RBP1.58□□□□□ -2.16
SHE9YDR393W YGR016WP53209 190 aa1.58□□□□□ -2.16
SHE9YDR393W CSI1Q04368 295 aa1.58□□□□□ -2.16
SHE9YDR393W YDR222WQ04925 415 aa1.58□□□□□ -2.16
SHE9YDR393W YPR063CQ12160 140 aa1.58□□□□□ -2.16
SHE9YDR393W TFC7Q12415 435 aa1.58□□□□□ -2.16
SHE9YDR393W ACC1Q00955 2233 aaKnown RBP1.57□□□□□ -2.16
SHE9YDR393W MRPL20P22354 195 aaPredicted RBP1.57□□□□□ -2.16
SHE9YDR393W ARO4P32449 370 aaKnown RBP1.57□□□□□ -2.16
SHE9YDR393W MNN5P46982 586 aa1.57□□□□□ -2.16
SHE9YDR393W PXR1P53335 271 aaPredicted RBP1.57□□□□□ -2.16
SHE9YDR393W RDL2Q08742 149 aaKnown RBP1.57□□□□□ -2.16
SHE9YDR393W YPL264CQ08980 353 aa1.57□□□□□ -2.16
SHE9YDR393W YPL245WQ12179 454 aaKnown RBP1.57□□□□□ -2.16
SHE9YDR393W NFI1Q12216 726 aa1.57□□□□□ -2.16
SHE9YDR393W IES3Q12345 250 aa1.57□□□□□ -2.16
SHE9YDR393W TEL1P38110 2787 aa1.56□□□□□ -2.16
SHE9YDR393W CBP2P03874 630 aaPredicted RBP1.56□□□□□ -2.16
SHE9YDR393W SPS100P13130 326 aa1.56□□□□□ -2.16
SHE9YDR393W CSE1P33307 960 aa1.56□□□□□ -2.16
SHE9YDR393W BUD2P33314 1104 aa1.56□□□□□ -2.16
SHE9YDR393W RVB1Q03940 463 aaKnown RBP1.56□□□□□ -2.16
SHE9YDR393W TRM10Q12400 293 aa1.56□□□□□ -2.16
SHE9YDR393W ERP3Q12403 225 aa1.56□□□□□ -2.16
SHE9YDR393W SPO24Q3E752 67 aa1.56□□□□□ -2.16
SHE9YDR393W SIR4P11978 1358 aa1.56□□□□□ -2.16
SHE9YDR393W ERD1P16151 362 aa1.55□□□□□ -2.16
SHE9YDR393W UIP5P36137 443 aa1.55□□□□□ -2.16
SHE9YDR393W SIF2P38262 535 aa1.55□□□□□ -2.16
SHE9YDR393W MED8P38304 223 aa1.55□□□□□ -2.16
SHE9YDR393W YFR045WP43617 309 aa1.55□□□□□ -2.16
SHE9YDR393W YDR114CQ04597 100 aa1.55□□□□□ -2.16
SHE9YDR393W BUR2Q05949 395 aa1.55□□□□□ -2.16
SHE9YDR393W PLB3Q08108 686 aa1.55□□□□□ -2.16
SHE9YDR393W MIM1Q08176 113 aa1.55□□□□□ -2.16
SHE9YDR393W SGT2Q12118 346 aaKnown RBP1.55□□□□□ -2.16
SHE9YDR393W YDR262WQ12331 272 aa1.55□□□□□ -2.16
SHE9YDR393W YIL177CP40434 1758 aa1.55□□□□□ -2.16
SHE9YDR393W YJL225CP40889 1758 aa1.55□□□□□ -2.16
SHE9YDR393W APC1P53886 1748 aa1.54□□□□□ -2.16
SHE9YDR393W KRE1P17260 313 aa1.54□□□□□ -2.16
SHE9YDR393W POT1P27796 417 aaKnown RBP RIP-Chip data1.54□□□□□ -2.16not detected
SHE9YDR393W SUR1P33300 382 aa1.54□□□□□ -2.16
SHE9YDR393W MED6P38782 295 aa1.54□□□□□ -2.16
SHE9YDR393W EDC2P40023 145 aaPredicted RBP1.54□□□□□ -2.16
SHE9YDR393W ECO1P43605 281 aa1.54□□□□□ -2.16
SHE9YDR393W FYV8P46949 817 aaKnown RBP1.54□□□□□ -2.16
SHE9YDR393W YNR066CP53752 436 aa1.54□□□□□ -2.16
SHE9YDR393W YPL080CQ02826 108 aa1.54□□□□□ -2.16
SHE9YDR393W DXO1Q06349 442 aa1.54□□□□□ -2.16
SHE9YDR393W YLR012CQ07927 99 aa1.54□□□□□ -2.16
SHE9YDR393W VIK1Q12045 647 aa1.54□□□□□ -2.16
SHE9YDR393W LYS2P07702 1392 aa1.54□□□□□ -2.16
SHE9YDR393W PMD1P32634 1753 aa1.53□□□□□ -2.16
SHE9YDR393W RIM15P43565 1770 aa1.53□□□□□ -2.16
SHE9YDR393W RNR2P09938 399 aaKnown RBP1.53□□□□□ -2.16
SHE9YDR393W PES4P39684 611 aa1.53□□□□□ -2.16
SHE9YDR393W PCL7P40186 285 aa1.53□□□□□ -2.16
SHE9YDR393W YGR168CP53293 376 aa1.53□□□□□ -2.16
SHE9YDR393W YNL040WP53960 456 aaPredicted RBP1.53□□□□□ -2.16
SHE9YDR393W ACT1P60010 375 aaKnown RBP1.53□□□□□ -2.16
SHE9YDR393W PML1Q07930 204 aaPredicted RBP1.53□□□□□ -2.16
SHE9YDR393W MRX4Q12467 430 aa1.53□□□□□ -2.16
SHE9YDR393W FMP27Q06179 2628 aa1.53□□□□□ -2.17
SHE9YDR393W GCN1P33892 2672 aaKnown RBP1.52□□□□□ -2.17
SHE9YDR393W YEL043WP32618 956 aa1.52□□□□□ -2.17
SHE9YDR393W AIM29P36154 155 aa1.52□□□□□ -2.17
SHE9YDR393W PET8P38921 284 aa1.52□□□□□ -2.17
SHE9YDR393W YFL040WP43562 540 aa1.52□□□□□ -2.17
SHE9YDR393W BAT2P47176 376 aaKnown RBP1.52□□□□□ -2.17
SHE9YDR393W IRC4Q03036 179 aa1.52□□□□□ -2.17
SHE9YDR393W UBX2Q04228 584 aa1.52□□□□□ -2.17
SHE9YDR393W ARC18Q05933 178 aaKnown RBP1.52□□□□□ -2.17
SHE9YDR393W YOR292CQ08743 309 aa1.52□□□□□ -2.17
SHE9YDR393W FIG2P25653 1609 aa1.51□□□□□ -2.17
SHE9YDR393W RPL18AP0CX49 186 aaKnown RBP1.51□□□□□ -2.17
SHE9YDR393W RPL18BP0CX50 186 aaKnown RBP1.51□□□□□ -2.17
SHE9YDR393W VPS1P21576 704 aaKnown RBP1.51□□□□□ -2.17
SHE9YDR393W RSA4P25382 515 aaKnown RBP1.51□□□□□ -2.17
SHE9YDR393W SMI1P32566 505 aa1.51□□□□□ -2.17
SHE9YDR393W MRPL6P32904 214 aa1.51□□□□□ -2.17
SHE9YDR393W SPL2P38839 148 aa1.51□□□□□ -2.17
SHE9YDR393W PDR16P53860 351 aaKnown RBP1.51□□□□□ -2.17
SHE9YDR393W PSY3Q12318 242 aa1.51□□□□□ -2.17
SHE9YDR393W YAK1P14680 807 aa1.5□□□□□ -2.17
SHE9YDR393W VPH2P32341 215 aa1.5□□□□□ -2.17
SHE9YDR393W VPH1P32563 840 aaKnown RBP1.5□□□□□ -2.17
SHE9YDR393W ZRT1P32804 376 aa1.5□□□□□ -2.17
SHE9YDR393W YHR035WP38769 630 aa1.5□□□□□ -2.17
SHE9YDR393W APE4P38821 490 aa1.5□□□□□ -2.17
SHE9YDR393W LIN1P38852 340 aaPredicted RBP1.5□□□□□ -2.17
SHE9YDR393W SOP4P39543 234 aaPredicted RBP1.5□□□□□ -2.17
SHE9YDR393W SNX41Q04053 625 aa1.5□□□□□ -2.17
SHE9YDR393W UTP23Q12339 254 aaKnown RBP1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms