RNA–Protein interactions for RNA: YBL067C

UBP13, Transcript of Ubiquitin-specific protease that cleaves Ub-protein fusions, yeast

Gene UBP13, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP13	YBL067C	WWM1	P43582	211 aa	Known RBP	6.25	□□□□□ -1.41
UBP13	YBL067C	HMS2	P47175	358 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	CAF40	P53829	373 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	STP1	Q00947	519 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	ABF2	Q02486	183 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	DYN2	Q02647	92 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	MHR1	Q06630	226 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	CTA1	P15202	515 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	TRM7	P38238	310 aa	Known RBP	6.25	□□□□□ -1.41
UBP13	YBL067C	WSC4	P38739	605 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	KEG1	P43614	200 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	IRC18	P47056	224 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	NEJ1	Q06148	342 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	TPO4	Q12256	659 aa		6.25	□□□□□ -1.41
UBP13	YBL067C	SME1	Q12330	94 aa	Predicted RBP	6.25	□□□□□ -1.41
UBP13	YBL067C	SLY1	P22213	666 aa		6.24	□□□□□ -1.41
UBP13	YBL067C	BUB3	P26449	341 aa		6.24	□□□□□ -1.41
UBP13	YBL067C	MCR1	P36060	302 aa	Known RBP	6.24	□□□□□ -1.41
UBP13	YBL067C	YDL177C	Q12257	170 aa		6.24	□□□□□ -1.41
UBP13	YBL067C	ILV1	P00927	576 aa	Known RBP	6.23	□□□□□ -1.41
UBP13	YBL067C	TOP2	P06786	1428 aa	Known RBP	6.23	□□□□□ -1.41
UBP13	YBL067C	CPR3	P25719	182 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	MUD1	P32605	298 aa	Known RBP	6.23	□□□□□ -1.41
UBP13	YBL067C	PRY1	P47032	299 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	YJR012C	P47087	207 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	MPA43	P53583	542 aa	Predicted RBP	6.23	□□□□□ -1.41
UBP13	YBL067C	FYV6	P53913	173 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	SWS2	P53937	143 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	SFH1	Q06168	426 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	YOP1	Q12402	180 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	PPH21	P23594	369 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	YHR035W	P38769	630 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	SER33	P40510	469 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	SSK1	Q07084	712 aa		6.23	□□□□□ -1.41
UBP13	YBL067C	MET2	P08465	486 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	TFS1	P14306	219 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	AMD1	P15274	810 aa	Known RBP	6.22	□□□□□ -1.41
UBP13	YBL067C	CUE1	P38428	203 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	UFE1	P41834	346 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	YDL218W	Q07629	317 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	THI72	Q08579	599 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	DAS2	Q12084	232 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	FOL3	Q12676	427 aa	Predicted RBP	6.22	□□□□□ -1.41
UBP13	YBL067C	SPT3	P06844	337 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	NMT1	P14743	455 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	DBF2	P22204	572 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	DRE2	P36152	348 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	ROT2	P38138	954 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	PRS3	P38689	320 aa	Known RBP	6.22	□□□□□ -1.41
UBP13	YBL067C	PRE6	P40303	254 aa	Known RBP	6.22	□□□□□ -1.41
UBP13	YBL067C	HPM1	P40481	377 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	YIL067C	P40514	678 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	UBC13	P52490	153 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	VHT1	P53241	593 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	HSK3	P69852	69 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	YMD8	Q03697	442 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	YML108W	Q03759	105 aa		6.22	□□□□□ -1.41
UBP13	YBL067C	BCY1	P07278	416 aa	Known RBP	6.21	□□□□□ -1.42
UBP13	YBL067C	MAK32	P23060	363 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	IFM1	P25038	676 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	UTR4	P32626	227 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	SPT4	P32914	102 aa	Predicted RBP	6.21	□□□□□ -1.42
UBP13	YBL067C	RBG1	P39729	369 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	ASI3	P53983	676 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	RHO4	Q00246	291 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	PET191	Q02772	108 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	COQ10	Q08058	207 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	YLR126C	Q12288	251 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	RAX2	Q12465	1220 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	SSN2	P38931	1420 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	MRPL28	P36527	147 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	MIT1	P40002	666 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	PDR17	P53844	350 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	TIM8	P57744	87 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	YMR206W	Q03695	313 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	SNX41	Q04053	625 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	YLR012C	Q07927	99 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	YLR050C	Q12155	161 aa	Known RBP	6.21	□□□□□ -1.42
UBP13	YBL067C	BBP1	Q12365	385 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	HMS1	Q12398	434 aa		6.21	□□□□□ -1.42
UBP13	YBL067C	RPP2A	P05319	106 aa	Known RBP	6.2	□□□□□ -1.42
UBP13	YBL067C	NHP6A	P11632	93 aa	Known RBP	6.2	□□□□□ -1.42
UBP13	YBL067C	KTI12	P34253	313 aa	Known RBP	6.2	□□□□□ -1.42
UBP13	YBL067C	YIL029C	P40538	142 aa		6.2	□□□□□ -1.42
UBP13	YBL067C	TDA10	P42938	290 aa		6.2	□□□□□ -1.42
UBP13	YBL067C	YJR030C	P47101	745 aa		6.2	□□□□□ -1.42
UBP13	YBL067C	AIM34	Q03673	198 aa		6.2	□□□□□ -1.42
UBP13	YBL067C	TUB1	P09733	447 aa	Known RBP	6.19	□□□□□ -1.42
UBP13	YBL067C	SDS24	P38314	527 aa		6.19	□□□□□ -1.42
UBP13	YBL067C	COS6	P53344	381 aa		6.19	□□□□□ -1.42
UBP13	YBL067C	YNR048W	P53740	393 aa		6.19	□□□□□ -1.42
UBP13	YBL067C	CWC25	P53854	179 aa	Known RBP	6.19	□□□□□ -1.42
UBP13	YBL067C	LGE1	Q02796	332 aa	Known RBP	6.19	□□□□□ -1.42
UBP13	YBL067C	TSA2	Q04120	196 aa		6.19	□□□□□ -1.42
UBP13	YBL067C	DYN3	Q04949	312 aa		6.19	□□□□□ -1.42
UBP13	YBL067C	EFG1	Q3E705	233 aa	Known RBP	6.19	□□□□□ -1.42
UBP13	YBL067C	MRP2	P10663	115 aa	Predicted RBP	6.19	□□□□□ -1.42
UBP13	YBL067C	YCR006C	P25350	157 aa		6.19	□□□□□ -1.42
UBP13	YBL067C	UGX2	P32772	223 aa		6.19	□□□□□ -1.42
UBP13	YBL067C	APL3	P38065	1025 aa		6.19	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms