RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 LONRF1Q17RB8 773 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 LMBRD2Q68DH5 695 aaPredicted RBP15.71■□□□□ 0.11
SCARB2-221ENST00000640341 NOP9Q86U38 636 aaKnown RBP15.71■□□□□ 0.11
SCARB2-221ENST00000640341 OLIG1Q8TAK6 271 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 MTFR1LQ9H019 292 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 SLC40A1Q9NP59 571 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 KLC4Q9NSK0 619 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 INTS9Q9NV88 658 aaKnown RBP15.71■□□□□ 0.11
SCARB2-221ENST00000640341 HSPBP1Q9NZL4 362 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 MTRF1LQ9UGC7 380 aaKnown RBP15.71■□□□□ 0.11
SCARB2-221ENST00000640341 CCPG1Q9ULG6 757 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 NENFQ9UMX5 172 aa15.71■□□□□ 0.11
SCARB2-221ENST00000640341 KIAA0391O15091 583 aaKnown RBP15.71■□□□□ 0.1
SCARB2-221ENST00000640341 CYP3A4P08684 503 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 ITGB5P18084 799 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 VCAM1P19320 739 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 PDE6BP35913 854 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 CC2D2BQ6DHV5 1058 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 LLGL2Q6P1M3 1020 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 CNPY4Q8N129 248 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 XPO6Q96QU8 1125 aaKnown RBP15.71■□□□□ 0.1
SCARB2-221ENST00000640341 MKNK1Q9BUB5 465 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 PABPC3Q9H361 631 aaKnown RBP15.71■□□□□ 0.1
SCARB2-221ENST00000640341 KCNK9Q9NPC2 374 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 KCNH7Q9NS40 1196 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 TBK1Q9UHD2 729 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 STK24Q9Y6E0 443 aa15.71■□□□□ 0.1
SCARB2-221ENST00000640341 FRMPD4Q14CM0 1322 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 RHOT2Q8IXI1 618 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 ZNF564Q8TBZ8 553 aaPredicted RBP15.7■□□□□ 0.1
SCARB2-221ENST00000640341 CHMP6Q96FZ7 201 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 VCPKMTQ9H867 229 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 TRPC6Q9Y210 931 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 NFIBO00712 420 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 PPIP5K2O43314 1243 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 FSBPO95073 299 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 PPP2R5CQ13362 524 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 AGBL2Q5U5Z8 902 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 HAUS6Q7Z4H7 955 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 NLGN1Q8N2Q7 840 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 SLC5A5Q92911 643 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 PWWP2AQ96N64 755 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 ZSWIM1Q9BR11 485 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 HEMGNQ9BXL5 484 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 ZHX2Q9Y6X8 837 aa15.7■□□□□ 0.1
SCARB2-221ENST00000640341 CALCOCO2Q13137 446 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 PPP2R5AQ15172 486 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 INTS8Q75QN2 995 aaKnown RBP15.69■□□□□ 0.1
SCARB2-221ENST00000640341 XXYLT1Q8NBI6 393 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 DDX23Q9BUQ8 820 aaKnown RBP15.69■□□□□ 0.1
SCARB2-221ENST00000640341 TRIM7Q9C029 511 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 ZDHHC18Q9NUE0 388 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 MRPL11Q9Y3B7 192 aaKnown RBP15.69■□□□□ 0.1
SCARB2-221ENST00000640341 NCANO14594 1321 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 PHF2O75151 1096 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 PPFIA2O75334 1257 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 ZKSCAN8Q15776 578 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-221ENST00000640341 ZDHHC24Q6UX98 284 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 CCDC50Q8IVM0 306 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 PLEKHO2Q8TD55 490 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 TMEM39BQ9GZU3 492 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-221ENST00000640341 SYNGAP1Q96PV0 1343 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 ANXA13P27216 316 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 PNMA8AQ86V59 439 aaPredicted RBP15.69■□□□□ 0.1
SCARB2-221ENST00000640341 LRRC34Q8IZ02 419 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 HVCN1Q96D96 273 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 TBC1D31Q96DN5 1066 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 SEL1LQ9UBV2 794 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 MTUS1Q9ULD2 1270 aa15.69■□□□□ 0.1
SCARB2-221ENST00000640341 TESPA1A2RU30 521 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-221ENST00000640341 RASGRF2O14827 1237 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 XKR9Q5GH70 373 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 CHURC1Q8WUH1 139 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 TMEM117Q9H0C3 514 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 EHMT1Q9H9B1 1298 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 DMAC2Q9NW81 257 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 ODF2LQ9ULJ1 636 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 RARAP10276 462 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 LMO3Q8TAP4 145 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 GDAP1Q8TB36 358 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 EPS8L1Q8TE68 723 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 TATDN2Q93075 761 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 MRRFQ96E11 262 aaKnown RBP15.68■□□□□ 0.1
SCARB2-221ENST00000640341 ADAM33Q9BZ11 813 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 CTNNAL1Q9UBT7 734 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 KLRG2A4D1S0 409 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-221ENST00000640341 H0YIN7 160 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 SLC26A4O43511 780 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 CREB1P16220 341 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 EIF3BP55884 814 aaKnown RBP15.68■□□□□ 0.1
SCARB2-221ENST00000640341 HIBCHQ6NVY1 386 aaPredicted RBP15.68■□□□□ 0.1
SCARB2-221ENST00000640341 EIF1ADQ8N9N8 165 aaKnown RBP15.68■□□□□ 0.1
SCARB2-221ENST00000640341 TCP11Q8WWU5 503 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 SEMA4DQ92854 862 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 ACCSQ96QU6 501 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 EPB41L4BQ9H329 900 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 COL20A1Q9P218 1284 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 BAIAP2L1Q9UHR4 511 aa15.68■□□□□ 0.1
SCARB2-221ENST00000640341 RPTORQ8N122 1335 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms