RNA–Protein interactions for RNA: ENST00000636120.1

PDE4D-228, Transcript of phosphodiesterase 4D, humanhuman

TSL 5 BASIC

Gene PDE4D, Length 6,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-228ENST00000636120 TROAPQ12815 778 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 TWF2Q6IBS0 349 aaKnown RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 CC2D1AQ6P1N0 951 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 SCYL3Q8IZE3 742 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 ZC3H15Q8WU90 426 aaKnown RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 SEPT1Q8WYJ6 367 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 HAUS8Q9BT25 410 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 TAF1DQ9H5J8 278 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 SUCLA2Q9P2R7 463 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 NOVA2Q9UNW9 492 aaKnown RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 IGSF9BQ9UPX0 1349 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 KRT37O76014 449 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 ZNF18P17022 549 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 PMS2P54278 862 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 EMC2Q15006 297 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 MUM1Q2TAK8 710 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 ZNF746Q6NUN9 644 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 ENGASEQ8NFI3 743 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 SAAL1Q96ER3 474 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 ELP3Q9H9T3 547 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 INTUQ9ULD6 942 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 NOC2LQ9Y3T9 749 aaKnown RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 CASZ1Q86V15 1759 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 AP3B1O00203 1094 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 TXNP10599 105 aaKnown RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 NMT1P30419 496 aaKnown RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 ELF1P32519 619 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 CCZ1BP86790 482 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 CCZ1P86791 482 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 RCOR2Q8IZ40 523 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 SYT2Q8N9I0 419 aaPredicted RBP6.89□□□□□ -1.31
PDE4D-228ENST00000636120 TNIP3Q96KP6 325 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 NUDCD1Q96RS6 583 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 IL25Q9H293 177 aa6.89□□□□□ -1.31
PDE4D-228ENST00000636120 FAM205CA6NFA0 338 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SPDYE16A6NNV3 312 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 XPAP23025 273 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 CCT5P48643 541 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 PSMC1P62191 440 aaKnown RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 BAATQ14032 418 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SGSM1Q2NKQ1 1148 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SPDYE2Q495Y8 402 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 ITPRIPL1Q6GPH6 555 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 ELMOD1Q8N336 334 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 HDAC11Q96DB2 347 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 BAIAP2L1Q9UHR4 511 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 H3BRJ5 948 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 EXTL3O43909 919 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 TAC1P20366 129 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 ROR1Q01973 937 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 DMTNQ08495 405 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 MMEL1Q495T6 779 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 TAB3Q8N5C8 712 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 C11orf70Q9BRQ4 267 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SAYSD1Q9NPB0 183 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 RGL1Q9NZL6 768 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SYNPO2Q9UMS6 1093 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 PPME1Q9Y570 386 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 CTIFO43310 598 aaKnown RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 ZWINTO95229 277 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 NR3C2P08235 984 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SPARCL1Q14515 664 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 PTPAQ15257 358 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 TRIP13Q15645 432 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 CDO1Q16878 200 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 GBP7Q8N8V2 638 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 PRPF31Q8WWY3 499 aaKnown RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 LRGUKQ96M69 825 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SENP2Q9HC62 589 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 TMEM8AQ9HCN3 771 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 ANGPTL3Q9Y5C1 460 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 PPP1R3GB7ZBB8 358 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 DCTN3O75935 186 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 CETPP11597 493 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 CLNS1AP54105 237 aaKnown RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SEC23AQ15436 765 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 TAF1BQ53T94 588 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 LRRC31Q6UY01 552 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 RBM43Q6ZSC3 357 aaKnown RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 FAM129AQ9BZQ8 928 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 EPS15L1Q9UBC2 864 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 POLLQ9UGP5 575 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 ABCC6O95255 1503 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 HGSO14964 777 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 GPC4O75487 556 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 KRT38O76015 456 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SAT1P21673 171 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 GMPSP49915 693 aaPredicted RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 RBP5P82980 135 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 NAB2Q15742 525 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SNRNP35Q16560 246 aaKnown RBP6.88□□□□□ -1.31
PDE4D-228ENST00000636120 DBN1Q16643 649 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 BBS9Q3SYG4 887 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 EFHC2Q5JST6 749 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 IER5Q5VY09 327 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 NFRKBQ6P4R8 1299 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 CYFIP1Q7L576 1253 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 PASD1Q8IV76 773 aa6.88□□□□□ -1.31
PDE4D-228ENST00000636120 SH3TC2Q8TF17 1288 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms