RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 CXCR5P32302 372 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 SOX5P35711 763 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 HUNKP57058 714 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 BIRC3Q13489 604 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 SLC39A4Q6P5W5 647 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 CTAGE6Q86UF2 777 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 ARHGEF19Q8IW93 802 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 CTAGE4Q8IX94 777 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 GPD1LQ8N335 351 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 TRIM58Q8NG06 486 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 LOXHD1Q8IVV2 1947 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 ZNF185O15231 689 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 ATG7O95352 703 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 ABCB4P21439 1286 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 MYBPC2Q14324 1141 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 PHLDB3Q6NSJ2 640 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 FBXO38Q6PIJ6 1188 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 IRF2BP2Q7Z5L9 587 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 SRGAP1Q7Z6B7 1085 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 RHPN2Q8IUC4 686 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 GLYCTKQ8IVS8 523 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 C10orf67Q8IYJ2 551 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
VTA1-205ENST00000620996 HVCN1Q96D96 273 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 MAF1Q9H063 256 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 TMEM117Q9H0C3 514 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 FTCDO95954 541 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 GJB1P08034 283 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 ASTE1Q2TB18 679 aaPredicted RBP10.76□□□□□ -0.69
VTA1-205ENST00000620996 ALKBH5Q6P6C2 394 aaKnown RBP10.76□□□□□ -0.69
VTA1-205ENST00000620996 KCNV1Q6PIU1 500 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 USP37Q86T82 979 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 SCFD2Q8WU76 684 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 KAT5Q92993 513 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 MSTO1Q9BUK6 570 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 STK33Q9BYT3 514 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 DHX33Q9H6R0 707 aaKnown RBP10.76□□□□□ -0.69
VTA1-205ENST00000620996 NMRK2Q9NPI5 230 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 CPA4Q9UI42 421 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 SALL4Q9UJQ4 1053 aa10.76□□□□□ -0.69
VTA1-205ENST00000620996 BZW2Q9Y6E2 419 aaKnown RBP10.76□□□□□ -0.69
VTA1-205ENST00000620996 ZNF233A6NK53 670 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 LRRIQ3A6PVS8 624 aaPredicted RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 TNFAIP3P21580 790 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 KLRC1P26715 233 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 RFC5P40937 340 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 TERF2Q15554 542 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 TAS1R3Q7RTX0 852 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 RNF149Q8NC42 400 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 MS4A4AQ96JQ5 239 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 FAM167AQ96KS9 214 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 PI4K2AQ9BTU6 479 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 PDLIM7Q9NR12 457 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 AGO2Q9UKV8 859 aaKnown RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 LCTP09848 1927 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 LOC285556D6RIA3 1793 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 DNAJC25-GNG10A0A024R161 153 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 FOXN3O00409 490 aaPredicted RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 ZNF286BP0CG31 522 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 ADCYAP1R1P41586 468 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 NAMPTP43490 491 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 CAPSQ13938 189 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 WHAMMP3Q1A5X7 153 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 BRDTQ58F21 947 aaPredicted RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 CCDC181Q5TID7 509 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 KRT39Q6A163 491 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 C12orf56Q8IXR9 622 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 SCLT1Q96NL6 688 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 PARK7Q99497 189 aaKnown RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 ARGLU1Q9NWB6 273 aaPredicted RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 ARHGAP28Q9P2N2 729 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 MYH9P35579 1960 aaKnown RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 PALMO75781 387 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 CCDC172P0C7W6 258 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 KRT5P13647 590 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 CLCN3P51790 818 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 HNRNPH2P55795 449 aaKnown RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 JAM2P57087 298 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 NLRP11P59045 1033 aaKnown RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 CYP24A1Q07973 514 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 DPY19L2P1Q6NXN4 242 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 NFRKBQ6P4R8 1299 aa10.75□□□□□ -0.69
VTA1-205ENST00000620996 CDR2LQ86X02 465 aaPredicted RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 PSPC1Q8WXF1 523 aaKnown RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 NTPCRQ9BSD7 190 aaKnown RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 NIFKQ9BYG3 293 aaKnown RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 PACSIN2Q9UNF0 486 aaPredicted RBP10.75□□□□□ -0.69
VTA1-205ENST00000620996 INO80B-WBP1J3KQ70 363 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 LCA5LO95447 670 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 RNASE9P60153 205 aaKnown RBP10.74□□□□□ -0.69
VTA1-205ENST00000620996 OSTNP61366 133 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 SNRPFP62306 86 aaKnown RBP10.74□□□□□ -0.69
VTA1-205ENST00000620996 PLCB4Q15147 1175 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 SPRYD7Q5W111 196 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 ZBTB8OSQ8IWT0 167 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 TAS1R2Q8TE23 839 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 PARD3BQ8TEW8 1205 aa10.74□□□□□ -0.69
VTA1-205ENST00000620996 GTF3C2Q8WUA4 911 aaPredicted RBP10.74□□□□□ -0.69
VTA1-205ENST00000620996 INO80BQ9C086 356 aaPredicted RBP10.74□□□□□ -0.69
VTA1-205ENST00000620996 GOLPH3Q9H4A6 298 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms