RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TMEM173Q86WV6 379 aaPredicted RBP19.86■□□□□ 0.77
CHMP2A-203ENST00000597209 VPS52Q8N1B4 723 aa19.86■□□□□ 0.77
CHMP2A-203ENST00000597209 C2orf40Q9H1Z8 148 aa19.86■□□□□ 0.77
CHMP2A-203ENST00000597209 FZD8Q9H461 694 aa19.86■□□□□ 0.77
CHMP2A-203ENST00000597209 GIT1Q9Y2X7 761 aa19.86■□□□□ 0.77
CHMP2A-203ENST00000597209 ZMYM2Q9UBW7 1377 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 LRRIQ4A6NIV6 560 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 B4GALT3O60512 393 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 CXCL14O95715 111 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 HOXB8P17481 243 aaPredicted RBP19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 GJB2P29033 226 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 AFF1P51825 1210 aaKnown RBP19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 RBM10P98175 930 aaKnown RBP19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 SLC27A1Q6PCB7 646 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 ZBTB8OSQ8IWT0 167 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 HACE1Q8IYU2 909 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 BCL7CQ8WUZ0 217 aaPredicted RBP19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 SUSD6Q92537 303 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 FAM193BQ96PV7 902 aaPredicted RBP19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 GBP3Q9H0R5 595 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 S1PR5Q9H228 398 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 RNF39Q9H2S5 420 aa19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 USP15Q9Y4E8 981 aaPredicted RBP19.85■□□□□ 0.77
CHMP2A-203ENST00000597209 B4GALT5O43286 388 aa19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 COL9A1P20849 921 aa19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 NAMPTP43490 491 aa19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 PPP2R5AQ15172 486 aa19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 TMEM31Q5JXX7 168 aa19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 CASP10Q92851 521 aa19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 TRIM6Q9C030 488 aaPredicted RBP19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 KIAA1024Q9UPX6 916 aa19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 FAN1Q9Y2M0 1017 aa19.84■□□□□ 0.77
CHMP2A-203ENST00000597209 ARL5CA6NH57 179 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 CLASP2O75122 1294 aaKnown RBP19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 POMCP01189 267 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 DSC1Q08554 894 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 IL17AQ16552 155 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 MCTP1Q6DN14 999 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 SYCE2Q6PIF2 218 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 DTHD1Q6ZMT9 781 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 COLGALT2Q8IYK4 626 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 SNX29Q8TEQ0 813 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 BSNDQ8WZ55 320 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 KIFAP3Q92845 792 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 GAD1Q99259 594 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 LRFN3Q9BTN0 628 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 PHF7Q9BWX1 381 aaPredicted RBP19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 BHMT2Q9H2M3 363 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 C11orf16Q9NQ32 467 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 DDX19AQ9NUU7 478 aaKnown RBP19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 HES2Q9Y543 173 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 HCFC2Q9Y5Z7 792 aa19.83■□□□□ 0.77
CHMP2A-203ENST00000597209 LOC730098B7Z3J9 87 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 H3BQV1 296 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 NRP1O14786 923 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 DCXO43602 365 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 MLH1P40692 756 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 CBX2Q14781 532 aaPredicted RBP19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 KRT79Q5XKE5 535 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 KCTD17Q8N5Z5 321 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 VN1R3Q9BXE9 311 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 CCDC113Q9H0I3 377 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 NXF3Q9H4D5 531 aaKnown RBP19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 MIOSQ9NXC5 875 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 SMC3Q9UQE7 1217 aa19.82■□□□□ 0.76
CHMP2A-203ENST00000597209 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 ACKR2O00590 384 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 N4BP3O15049 544 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 NPTXRO95502 500 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 ATP2C1P98194 919 aaPredicted RBP19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 MAPK6Q16659 721 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 TPRNQ4KMQ1 711 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 LLGL2Q6P1M3 1020 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 GSTCDQ8NEC7 633 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 DEPTORQ8TB45 409 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 IFT74Q96LB3 600 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 DNM3Q9UQ16 869 aa19.81■□□□□ 0.76
CHMP2A-203ENST00000597209 LILRB3O75022 631 aa19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 NR1I2O75469 434 aa19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 EFEMP2O95967 443 aa19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 SCNN1GP51170 649 aa19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 EFNA5P52803 228 aa19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 PRPF4BQ13523 1007 aaKnown RBP19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 PTPN14Q15678 1187 aa19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 ARL6IP4Q66PJ3 421 aaKnown RBP19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 PPFIBP1Q86W92 1011 aa19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 CDR2LQ86X02 465 aaPredicted RBP19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 ZFP42Q96MM3 310 aa19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 MMTAG2Q9BU76 263 aaKnown RBP19.8■□□□□ 0.76
CHMP2A-203ENST00000597209 PP2D1A8MPX8 630 aa19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 E9PMD0 336 aa19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 SOD2P04179 222 aa19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 PRKCBP05771 671 aa19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 AKAP5P24588 427 aa19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 CA8P35219 290 aa19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 OR1G1P47890 313 aa19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 ITIH3Q06033 890 aa19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 HERC4Q5GLZ8 1057 aaPredicted RBP19.79■□□□□ 0.76
CHMP2A-203ENST00000597209 HYIQ5T013 277 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms