RNA–Protein interactions for RNA: ENST00000584377.5

CSNK1D-222, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 2,891 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-222ENST00000584377 NEBLO76041 1014 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 PAX7P23759 505 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 MXI1P50539 228 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 PSMC5P62195 406 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 PRPF4BQ13523 1007 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 VTI1AQ96AJ9 217 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 IWS1Q96ST2 819 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 RMDN3Q96TC7 470 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 TIPINQ9BVW5 301 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 COG5Q9UP83 839 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 WDR64B1ANS9 1081 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 NDUFAB1O14561 156 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 SF3B2Q13435 895 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 XKR9Q5GH70 373 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 FAM102BQ5T8I3 360 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 DCAF12L1Q5VU92 463 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 RHOT2Q8IXI1 618 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 PLEKHO2Q8TD55 490 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 CARD9Q9H257 536 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 PLAAQ9Y263 795 aa14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 DIS3Q9Y2L1 958 aaKnown RBP14.26□□□□□ -0.13
CSNK1D-222ENST00000584377 TESPA1A2RU30 521 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 GOLGA8IPA6NC78 632 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 GOLGA8JA6NMD2 632 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 BHMG1C9JSJ3 638 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 TTI1O43156 1089 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 VCAM1P19320 739 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 JAK3P52333 1124 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 SNRPFP62306 86 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 SKOR1P84550 965 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 PLA2G4FQ68DD2 849 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 CIAPIN1Q6FI81 312 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 NSMFQ6X4W1 530 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 LRRC45Q96CN5 670 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 RNPC3Q96LT9 517 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 TEPSINQ96N21 525 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 PDCD2LQ9BRP1 358 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 TMEM117Q9H0C3 514 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 MAPK13O15264 365 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 DAPK3O43293 454 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 CCNE2O96020 404 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 FTLP02792 175 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 NCKAP1LP55160 1127 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 MTMR2Q13614 643 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 TNFAIP1Q13829 316 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 KCTD19Q17RG1 926 aaPredicted RBP14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 NAA35Q5VZE5 725 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 RNF207Q6ZRF8 634 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 SRCAPQ6ZRS2 3230 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 RPUSD2Q8IZ73 545 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 SAMD3Q8N6K7 520 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 CELF4Q9BZC1 486 aaKnown RBP14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 NEUROG2Q9H2A3 272 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 PXMP2Q9NR77 195 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 KLC4Q9NSK0 619 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 CTTNBP2NLQ9P2B4 639 aa14.25□□□□□ -0.13
CSNK1D-222ENST00000584377 CCDC169A6NNP5 214 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 CALRP27797 417 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 SFNP31947 248 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 HSD17B3P37058 310 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 KRT76Q01546 638 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 CEP85LQ5SZL2 805 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 WLSQ5T9L3 541 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ARHGEF16Q5VV41 709 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 KAT5Q92993 513 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 NAP1L3Q99457 506 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.24□□□□□ -0.132e-13■■■■■ 69.3
CSNK1D-222ENST00000584377 UTP11Q9Y3A2 253 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 KIF3CO14782 793 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 CTNND1O60716 968 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ZBED4O75132 1171 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 EGFRP00533 1210 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ADRB2P07550 413 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ATP1A2P50993 1020 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ZNF746Q6NUN9 644 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 CBWD2Q8IUF1 395 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 SLC17A8Q8NDX2 589 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 RPAP3Q9H6T3 665 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 SLC24A3Q9HC58 644 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 EXOC7Q9UPT5 735 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 NR2E1Q9Y466 385 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 A6NNZ2 444 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ECM2O94769 699 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 SMTNP53814 917 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 HADHBP55084 474 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 MAP2K1Q02750 393 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ZNF211Q13398 564 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 SNRNP35Q16560 246 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 TUBB8Q3ZCM7 444 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 NAIF1Q69YI7 327 aaPredicted RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ADAT2Q7Z6V5 191 aaKnown RBP14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 PPM1KQ8N3J5 372 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ATP6V1G3Q96LB4 118 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 KIFC3Q9BVG8 833 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ANKEF1Q9NU02 776 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 TBX20Q9UMR3 447 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 ALG6Q9Y672 507 aa14.24□□□□□ -0.13
CSNK1D-222ENST00000584377 GOLGA6L10A0A0M3HER8 536 aa14.23□□□□□ -0.13
CSNK1D-222ENST00000584377 GOLGA6L10A6NI86 522 aa14.23□□□□□ -0.13
CSNK1D-222ENST00000584377 PMM2O15305 246 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms