RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 FOXN3O00409 490 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-206ENST00000578373 CYTH3O43739 400 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 TMPRSS15P98073 1019 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 SH2D4BQ5SQS7 431 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 MIS18BP1Q6P0N0 1132 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 WDR93Q6P2C0 686 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 PARP9Q8IXQ6 854 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 MIPOL1Q8TD10 442 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 STK33Q9BYT3 514 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 RNF146Q9NTX7 359 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 FGFR1OP2Q9NVK5 253 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-206ENST00000578373 ZBED1O96006 694 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 PSAPP07602 524 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 GNA15P30679 374 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 PAPD7Q5XG87 772 aaKnown RBP12.84□□□□□ -0.35
ERBB2-206ENST00000578373 KCNK18Q7Z418 384 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 FAM160B2Q86V87 743 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 ATG4AQ8WYN0 398 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 SEC16BQ96JE7 1060 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 YIPF3Q9GZM5 350 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 TMEM117Q9H0C3 514 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 MAPK13O15264 365 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 PRPSAP2O60256 369 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 CENPPQ6IPU0 288 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 RINT1Q6NUQ1 792 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 CCT6BQ92526 530 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 LRRC37BQ96QE4 947 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 FAM49AQ9H0Q0 323 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-206ENST00000578373 ECT2Q9H8V3 914 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 GPRC5CQ9NQ84 441 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 TXLNGQ9NUQ3 528 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 HSPBP1Q9NZL4 362 aa12.84□□□□□ -0.35
ERBB2-206ENST00000578373 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
ERBB2-206ENST00000578373 RCCD1A6NED2 376 aa12.83□□□□□ -0.35
ERBB2-206ENST00000578373 CD248Q9HCU0 757 aa12.83□□□□□ -0.35
ERBB2-206ENST00000578373 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.35
ERBB2-206ENST00000578373 EPHB6O15197 1021 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 CORO7P57737 925 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 KIRREL3Q8IZU9 778 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 TMEM143Q96AN5 459 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 FAF2Q96CS3 445 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 SMYD3Q9H7B4 428 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 USP32Q8NFA0 1604 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 AKAP3O75969 853 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 TJP3O95049 919 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 CCND2P30279 289 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 ECE1P42892 770 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 NBPF9Q3BBW0 867 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 CDR2LQ86X02 465 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-206ENST00000578373 SLC4A9Q96Q91 983 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 PSD3Q9NYI0 1048 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 GYG2O15488 501 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 ARSEP51690 589 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 BYSLQ13895 437 aaKnown RBP12.83□□□□□ -0.36
ERBB2-206ENST00000578373 RPS6KA2Q15349 733 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 SEZ6Q53EL9 994 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 MUM1L1Q5H9M0 696 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 ZNF571Q7Z3V5 609 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-206ENST00000578373 ELOA2Q8IYF1 753 aaPredicted RBP12.83□□□□□ -0.36
ERBB2-206ENST00000578373 TMEM35BQ8NCS4 154 aa12.83□□□□□ -0.36
ERBB2-206ENST00000578373 XPO6Q96QU8 1125 aaKnown RBP12.83□□□□□ -0.36
ERBB2-206ENST00000578373 PPLO60437 1756 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 MYBL2P10244 700 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 PON1P27169 355 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 EPHB1P54762 984 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 KCTD2Q14681 263 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 PTGISQ16647 500 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 CCDC125Q86Z20 511 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 FBXO25Q8TCJ0 367 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 AGR3Q8TD06 166 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 SCFD1Q8WVM8 642 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 AFG3L2Q9Y4W6 797 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 GPR75-ASB3A0A0A6YYF3 556 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 TRPA1O75762 1119 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 SLC4A1P02730 911 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 RPA1P27694 616 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 YWHABP31946 246 aaKnown RBP12.82□□□□□ -0.36
ERBB2-206ENST00000578373 FXR2P51116 673 aaKnown RBP eCLIP12.82□□□□□ -0.362e-8■□□□□ 8.4
ERBB2-206ENST00000578373 GABPAQ06546 454 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 GRIK5Q16478 980 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 MDH1BQ5I0G3 518 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 FAM160B1Q5W0V3 765 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 TPCN2Q8NHX9 752 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 C18orf8Q96DM3 657 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 ERP44Q9BS26 406 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 NUF2Q9BZD4 464 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 MROH1Q8NDA8 1641 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 A0A1W2PQJ5 194 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 FAM187AA6NFU0 413 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 HNRNPH1P31943 449 aaKnown RBP12.82□□□□□ -0.36
ERBB2-206ENST00000578373 EPHA7Q15375 998 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 EDRF1Q3B7T1 1238 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 ARHGAP27Q6ZUM4 889 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 SYT2Q8N9I0 419 aaPredicted RBP12.82□□□□□ -0.36
ERBB2-206ENST00000578373 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.82□□□□□ -0.362e-7■■□□□ 11.6
ERBB2-206ENST00000578373 DTX3LQ8TDB6 740 aa12.82□□□□□ -0.36
ERBB2-206ENST00000578373 ACER1Q8TDN7 264 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms