RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 IQCF3P0C7M6 154 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 EIF4BP23588 611 aaKnown RBP18.12■□□□□ 0.49
TPM1-219ENST00000559397 MBTPS1Q14703 1052 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 LRRC55Q6ZSA7 311 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 LRRC8DQ7L1W4 858 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 ZC3H3Q8IXZ2 948 aaKnown RBP18.12■□□□□ 0.49
TPM1-219ENST00000559397 ZNF507Q8TCN5 953 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 TRIM43Q96BQ3 446 aaPredicted RBP18.12■□□□□ 0.49
TPM1-219ENST00000559397 SCLT1Q96NL6 688 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 TSG101Q99816 390 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 OSBPL7Q9BZF2 842 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 TANC1Q9C0D5 1861 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 FZD8Q9H461 694 aa18.12■□□□□ 0.49
TPM1-219ENST00000559397 RRAGDQ9NQL2 400 aaPredicted RBP18.12■□□□□ 0.49
TPM1-219ENST00000559397 RBAK-RBAKDNI3L0D1 243 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 EIF3DO15371 548 aaKnown RBP eCLIP18.11■□□□□ 0.49
TPM1-219ENST00000559397 CSDE1O75534 798 aaKnown RBP18.11■□□□□ 0.49
TPM1-219ENST00000559397 SCP2P22307 547 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 MSNP26038 577 aaKnown RBP18.11■□□□□ 0.49
TPM1-219ENST00000559397 HOXD13P35453 343 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 EFNA5P52803 228 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 ARID5BQ14865 1188 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 FBXO47Q5MNV8 452 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 SPECC1LQ69YQ0 1117 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 CCDC150Q8NCX0 1101 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 HTATIP2Q9BUP3 242 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 WNT8AQ9H1J5 351 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 TAB2Q9NYJ8 693 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 MAGEC2Q9UBF1 373 aaPredicted RBP18.11■□□□□ 0.49
TPM1-219ENST00000559397 TBX20Q9UMR3 447 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 PCDHB13Q9Y5F0 798 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 PHLPP2Q6ZVD8 1323 aa18.11■□□□□ 0.49
TPM1-219ENST00000559397 N4BP3O15049 544 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 PRPF6O94906 941 aaKnown RBP18.1■□□□□ 0.49
TPM1-219ENST00000559397 EDN1P05305 212 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 ITGB8P26012 769 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 CYP2C18P33260 490 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 KCNA1Q09470 495 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 LRMPQ12912 555 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 ALCAMQ13740 583 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 GPNMBQ14956 572 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 AMHR2Q16671 573 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 FAM187BQ17R55 369 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 ARMCX5Q6P1M9 558 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 CNOT6LQ96LI5 555 aaKnown RBP18.1■□□□□ 0.49
TPM1-219ENST00000559397 PPP1R12CQ9BZL4 782 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 INO80BQ9C086 356 aaPredicted RBP18.1■□□□□ 0.49
TPM1-219ENST00000559397 NOC2LQ9Y3T9 749 aaKnown RBP18.1■□□□□ 0.49
TPM1-219ENST00000559397 SQORQ9Y6N5 450 aa18.1■□□□□ 0.49
TPM1-219ENST00000559397 LGALS16A8MUM7 142 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 INO80B-WBP1J3KQ70 363 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 K7ERI5 159 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 ZNF500O60304 480 aaPredicted RBP18.09■□□□□ 0.49
TPM1-219ENST00000559397 TIMP1P01033 207 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 ABCD1P33897 745 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
TPM1-219ENST00000559397 LPIN1Q14693 890 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 MAPK6Q16659 721 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 KNOP1Q1ED39 458 aaKnown RBP18.09■□□□□ 0.49
TPM1-219ENST00000559397 EDRF1Q3B7T1 1238 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 FAM228AQ86W67 206 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 HVCN1Q96D96 273 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 CEP63Q96MT8 703 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 VPS16Q9H269 839 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 AGO3Q9H9G7 860 aaKnown RBP18.09■□□□□ 0.49
TPM1-219ENST00000559397 PRDM5Q9NQX1 630 aaPredicted RBP18.09■□□□□ 0.49
TPM1-219ENST00000559397 TRAF3IP3Q9Y228 551 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 UBE4BO95155 1302 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 ITIH6Q6UXX5 1313 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 ACKR2O00590 384 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 FGFR4P22455 802 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 PTPN21Q16825 1174 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 MAP4K3Q8IVH8 894 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 NELFCDQ8IXH7 590 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 TUBGCP2Q9BSJ2 902 aa18.09■□□□□ 0.49
TPM1-219ENST00000559397 PRMT7Q9NVM4 692 aaPredicted RBP18.09■□□□□ 0.49
TPM1-219ENST00000559397 SCN5AQ14524 2016 aa18.08■□□□□ 0.49
TPM1-219ENST00000559397 PDXKO00764 312 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 NBNO60934 754 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 RPS6KA5O75582 802 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 PRKCBP05771 671 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 GHRP10912 638 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 CCL23P55773 120 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 PCBP1Q15365 356 aaKnown RBP eCLIP18.08■□□□□ 0.484e-6■□□□□ 10.4
TPM1-219ENST00000559397 TSHZ1Q6ZSZ6 1077 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 STXBP4Q6ZWJ1 553 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 C7orf61Q8IZ16 206 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 USP38Q8NB14 1042 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 KIAA1524Q8TCG1 905 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 SCLYQ96I15 445 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 PRIMPOLQ96LW4 560 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 PYCARDQ9ULZ3 195 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 USP20Q9Y2K6 914 aa18.08■□□□□ 0.48
TPM1-219ENST00000559397 TTLL13PA6NNM8 815 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 TSPAN1O60635 241 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 CCZ1BP86790 482 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 CCZ1P86791 482 aaPredicted RBP18.07■□□□□ 0.48
TPM1-219ENST00000559397 STRN3Q13033 797 aa18.07■□□□□ 0.48
TPM1-219ENST00000559397 EEF2KMTQ96G04 330 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms