RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CCDC39Q9UFE4 941 aa4.49□□□□□ -1.69
ZEB1-212ENST00000558655 PCDHGA10Q9Y5H3 936 aa4.49□□□□□ -1.69
ZEB1-212ENST00000558655 COL1A2P08123 1366 aa4.49□□□□□ -1.69
ZEB1-212ENST00000558655 A0A1B0GVL5 298 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 GSTTP1A0A1W2PQM5 241 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 FAM221BA6H8Z2 402 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 WDR64B1ANS9 1081 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CTAGE5O15320 804 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SEPT4O43236 478 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ADCY3O60266 1144 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 MSCO60682 206 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 DKC1O60832 514 aaKnown RBP eCLIP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ATP9AO75110 1047 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 DUSP11O75319 330 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ARIH2O95376 493 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CCNE2O96020 404 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SUPT20HL2P0C7V6 817 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SPATA31C1P0DKV0 1188 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CCL5P13501 91 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 AKR1A1P14550 325 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 GLULP15104 373 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 RPA1P27694 616 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SP2Q02086 613 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CCL14Q16627 93 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 HSP90AA4PQ58FG1 418 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PLPPR4Q7Z2D5 763 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SH3RF1Q7Z6J0 888 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 LCA5Q86VQ0 697 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 FMR1NBQ8N0W7 255 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 MYO1HQ8N1T3 1032 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 KDF1Q8NAX2 398 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 KLHDC9Q8NEP7 349 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ERMNQ8TAM6 284 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 U2AF1L4Q8WU68 220 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 JPH3Q8WXH2 748 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 MRPS27Q92552 414 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CENPTQ96BT3 561 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 VMP1Q96GC9 406 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PNMA5Q96PV4 448 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CSRNP2Q9H175 543 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CBX8Q9HC52 389 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 JPH1Q9HDC5 661 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PRM3Q9NNZ6 103 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 NGRNQ9NPE2 291 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CNTN3Q9P232 1028 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SLC9A2Q9UBY0 812 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 DBR1Q9UK59 544 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 FAM184BQ9ULE4 1060 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PCDHA12Q9UN75 941 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 TRIOBPQ9H2D6 2365 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PRRT4C9JH25 899 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 HAS3O00219 553 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 GAS7O60861 476 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 INMTO95050 263 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SMPD1P17405 629 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 MARCKSP29966 332 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 HOXC8P31273 242 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ME1P48163 572 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 GRIN1Q05586 938 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CACNB2Q08289 660 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 GRB10Q13322 594 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SNW1Q13573 536 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 HAUS3Q68CZ6 603 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 RBM43Q6ZSC3 357 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 FBXO16Q8IX29 292 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 C4orf19Q8IY42 314 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 USP38Q8NB14 1042 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 APPL2Q8NEU8 664 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 FLCNQ8NFG4 579 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SH3TC2Q8TF17 1288 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SKA1Q96BD8 255 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 TBC1D31Q96DN5 1066 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 GPR20Q99678 358 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 HNRNPABQ99729 332 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 TSEN34Q9BSV6 310 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 NIFKQ9BYG3 293 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 NT5C3AQ9H0P0 336 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PAK6Q9NQU5 681 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ANKEF1Q9NU02 776 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 LMCD1Q9NZU5 365 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 DCTN4Q9UJW0 460 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 MAFFQ9ULX9 164 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 TRIP12Q14669 1992 aaPredicted RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 EVPLQ92817 2033 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 EML1O00423 815 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ADCY6O43306 1168 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ADAMTS4O75173 837 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PSAPP07602 524 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CYP2B6P20813 491 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CASP2P42575 452 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PSEN2P49810 448 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 ACTR2P61160 394 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 TNFAIP2Q03169 654 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 CCDC186Q7Z3E2 898 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 SESTD1Q86VW0 696 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 TTC8Q8TAM2 541 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 UHMK1Q8TAS1 419 aaKnown RBP4.48□□□□□ -1.69
ZEB1-212ENST00000558655 FAM167AQ96KS9 214 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 PCYT2Q99447 389 aa4.48□□□□□ -1.69
ZEB1-212ENST00000558655 EIF2AK1Q9BQI3 630 aaKnown RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms