RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 PPP1R12AO14974 1030 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 DHX15O43143 795 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 DEXIO95424 95 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 CHRNA1P02708 482 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 EPB42P16452 691 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 ATP4AP20648 1035 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 WDR4P57081 412 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 NLRP5P59047 1200 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 TTC39BQ5VTQ0 682 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 PEAR1Q5VY43 1037 aaPredicted RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 FAM160B1Q5W0V3 765 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 GALNT17Q6IS24 598 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 LRRC69Q6ZNQ3 347 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 NME8Q8N427 588 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 TOP1MTQ969P6 601 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 ANAPC16Q96DE5 110 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 ZNF577Q9BSK1 485 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 CCDC113Q9H0I3 377 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 NCOA5Q9HCD5 579 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 LATS2Q9NRM7 1088 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 R3HCC1Q9Y3T6 440 aaKnown RBP11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 PCDHA2Q9Y5H9 948 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 SQORQ9Y6N5 450 aa11.1□□□□□ -0.63
HNRNPC-228ENST00000557033 PTPRSQ13332 1948 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 ADAMTS3O15072 1205 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 HBP1O60381 514 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 CCNE2O96020 404 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 HTRA4P83105 476 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 MGAT3Q09327 533 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 PLCB4Q15147 1175 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 MIS18BP1Q6P0N0 1132 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 RUFY4Q6ZNE9 571 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 SMAP1Q8IYB5 467 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 USP38Q8NB14 1042 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 DNAJB3Q8WWF6 145 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 ATXN2LQ8WWM7 1075 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 PPM1EQ8WY54 764 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 ARNTL2Q8WYA1 636 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 SRRTQ9BXP5 876 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 OXCT2Q9BYC2 517 aaPredicted RBP11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 IFIH1Q9BYX4 1025 aaKnown RBP11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 UBP1Q9NZI7 540 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 LMCD1Q9NZU5 365 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 VPS54Q9P1Q0 977 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
HNRNPC-228ENST00000557033 CDH23Q9H251 3354 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 TMEM238LA0A1B0GVL6 79 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 SMIM35A0A1B0GVV1 85 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 LCHNA4D1U4 455 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 CDKL5O76039 1030 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 PF4P02776 101 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 CENPBP07199 599 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 EDN3P14138 238 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 TIMP2P16035 220 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 ERVK-21P61565 698 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 KRT76Q01546 638 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 FAM160A1Q05DH4 1040 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 ANKRD1Q15327 319 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 PRR16Q569H4 304 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 ZNF484Q5JVG2 852 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 SWSAP1Q6NVH7 229 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 TMCO2Q7Z6W1 182 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 MYOCDQ8IZQ8 938 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 LILRB2Q8N423 598 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 ATP8B4Q8TF62 1192 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 SHDQ96IW2 340 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 TGS1Q96RS0 853 aaKnown RBP11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 COL25A1Q9BXS0 654 aaPredicted RBP11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 TMX1Q9H3N1 280 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 CERS4Q9HA82 394 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 ZNF302Q9NR11 478 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 TCEAL9Q9UHQ7 104 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 TLR6Q9Y2C9 796 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 MSRB2Q9Y3D2 182 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 PCDHA10Q9Y5I2 948 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 MTCH2Q9Y6C9 303 aa11.08□□□□□ -0.64
HNRNPC-228ENST00000557033 COL1A2P08123 1366 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 EYSQ5T1H1 3165 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 M0QZ92 97 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 DDX39AO00148 427 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 RFXAPO00287 272 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 PPFIA3O75145 1194 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 ARHGEF15O94989 841 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 PSAPP07602 524 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 KLRC1P26715 233 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 MRPS6P82932 125 aaKnown RBP11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 TYRO3Q06418 890 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 LPIN1Q14693 890 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 FBXO47Q5MNV8 452 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 MTHFD1LQ6UB35 978 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 TSHZ1Q6ZSZ6 1077 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 SLITRK4Q8IW52 837 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 BLIDQ8IZY5 108 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 DAGLBQ8NCG7 672 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 NKD1Q969G9 470 aa11.07□□□□□ -0.64
HNRNPC-228ENST00000557033 LENG9Q96B70 501 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms