RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 C1orf186Q6ZWK4 172 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 ADGRD2Q7Z7M1 963 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 CABP7Q86V35 215 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 HSCBQ8IWL3 235 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 ZBTB8OSQ8IWT0 167 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 PRSS33Q8NF86 280 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 LRRC15Q8TF66 581 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 RSPH1Q8WYR4 309 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 KIFAP3Q92845 792 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 PRIMPOLQ96LW4 560 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 RSAD1Q9HA92 442 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 PRMT7Q9NVM4 692 aaPredicted RBP25.02■■□□□ 1.6
PABPN1-207ENST00000556821 HES2Q9Y543 173 aa25.02■■□□□ 1.6
PABPN1-207ENST00000556821 WDFY4Q6ZS81 3184 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 PLCB3Q01970 1234 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 HYAL1Q12794 435 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 HERC4Q5GLZ8 1057 aaPredicted RBP25.01■■□□□ 1.59
PABPN1-207ENST00000556821 BMP8AQ7Z5Y6 402 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 SLC39A11Q8N1S5 342 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 KCTD17Q8N5Z5 321 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 NT5C3AQ9H0P0 336 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 C2orf40Q9H1Z8 148 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 RNF39Q9H2S5 420 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 NRDE2Q9H7Z3 1164 aa25.01■■□□□ 1.59
PABPN1-207ENST00000556821 HIP1RO75146 1068 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 GTF2F1P35269 517 aaKnown RBP eCLIP25■■□□□ 1.591e-12■■■■■ 38.6
PABPN1-207ENST00000556821 LTBRP36941 435 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 BCAR1P56945 870 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 ERVFC1P60507 584 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 NCBP1Q09161 790 aaKnown RBP25■■□□□ 1.59
PABPN1-207ENST00000556821 SYT2Q8N9I0 419 aaPredicted RBP25■■□□□ 1.59
PABPN1-207ENST00000556821 CNNM3Q8NE01 707 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 DEPTORQ8TB45 409 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 MRPS27Q92552 414 aaKnown RBP25■■□□□ 1.59
PABPN1-207ENST00000556821 NXF3Q9H4D5 531 aaKnown RBP25■■□□□ 1.59
PABPN1-207ENST00000556821 TLR9Q9NR96 1032 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 FAM50BQ9Y247 325 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 USP20Q9Y2K6 914 aa25■■□□□ 1.59
PABPN1-207ENST00000556821 SLC26A4O43511 780 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 PPM1AP35813 382 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 LONP1P36776 959 aaKnown RBP24.99■■□□□ 1.59
PABPN1-207ENST00000556821 SLC12A3P55017 1021 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 MAPK6Q16659 721 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 SLC27A1Q6PCB7 646 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 TMEM173Q86WV6 379 aaPredicted RBP24.99■■□□□ 1.59
PABPN1-207ENST00000556821 CDK5RAP3Q96JB5 506 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 IFT74Q96LB3 600 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 SPG21Q9NZD8 308 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 DNAJB4Q9UDY4 337 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 LZTS1Q9Y250 596 aa24.99■■□□□ 1.59
PABPN1-207ENST00000556821 NT5C1B-RDH14C9J2C7 533 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 FSCN2O14926 492 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 INPPL1O15357 1258 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 ZC3H11AO75152 810 aaKnown RBP eCLIP24.98■■□□□ 1.59
PABPN1-207ENST00000556821 NPTXRO95502 500 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 PRKCBP05771 671 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 ITGA4P13612 1032 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 GUCY2CP25092 1073 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 CTC1Q2NKJ3 1217 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 IER5LQ5T953 404 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 ZNF280BQ86YH2 543 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 USP28Q96RU2 1077 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 PDZD7Q9H5P4 517 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 FBXO2Q9UK22 296 aaPredicted RBP24.98■■□□□ 1.59
PABPN1-207ENST00000556821 PLXNA3P51805 1871 aa24.98■■□□□ 1.59
PABPN1-207ENST00000556821 ACKR2O00590 384 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 DDHD2O94830 711 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 SSBP05455 408 aaKnown RBP eCLIP24.97■■□□□ 1.59
PABPN1-207ENST00000556821 PLA2G4BP0C869 781 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 MARCKSP29966 332 aaPredicted RBP24.97■■□□□ 1.59
PABPN1-207ENST00000556821 UBA7P41226 1012 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 NPTX2P47972 431 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 PEX3P56589 373 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 PRPF4BQ13523 1007 aaKnown RBP24.97■■□□□ 1.59
PABPN1-207ENST00000556821 USP49Q70CQ1 688 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 URGCPQ8TCY9 931 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 BCL7CQ8WUZ0 217 aaPredicted RBP24.97■■□□□ 1.59
PABPN1-207ENST00000556821 GAD1Q99259 594 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 APOL6Q9BWW8 343 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 ZSCAN16Q9H4T2 348 aaPredicted RBP24.97■■□□□ 1.59
PABPN1-207ENST00000556821 BLOC1S4Q9NUP1 217 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 CLDND1Q9NY35 253 aa24.97■■□□□ 1.59
PABPN1-207ENST00000556821 VWA8A3KMH1 1905 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 ANK1P16157 1881 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 LINC01565O15544 149 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 PLCG1P19174 1290 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 MLH1P40692 756 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 CEBPZQ03701 1054 aaKnown RBP24.96■■□□□ 1.59
PABPN1-207ENST00000556821 RAD51AP2Q09MP3 1159 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 KARSQ15046 597 aaKnown RBP24.96■■□□□ 1.59
PABPN1-207ENST00000556821 SMAD2Q15796 467 aaKnown RBP24.96■■□□□ 1.59
PABPN1-207ENST00000556821 EEF1DP3Q658K8 133 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 CALML4Q96GE6 196 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 DRC1Q96MC2 740 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 ZFP42Q96MM3 310 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 TRIM6Q9C030 488 aaPredicted RBP24.96■■□□□ 1.59
PABPN1-207ENST00000556821 GBP3Q9H0R5 595 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 MUTYHQ9UIF7 546 aa24.96■■□□□ 1.59
PABPN1-207ENST00000556821 MTCL1Q9Y4B5 1905 aaKnown RBP24.96■■□□□ 1.59
PABPN1-207ENST00000556821 C5orf42Q9H799 3197 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms