RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 XPAP23025 273 aaPredicted RBP7.55□□□□□ -1.2
CCDC7-209ENST00000539197 DUSP2Q05923 314 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 MGAT5Q09328 741 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 SEPT7Q16181 437 aaKnown RBP7.55□□□□□ -1.2
CCDC7-209ENST00000539197 HECTD2Q5U5R9 776 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 DOK3Q7L591 496 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 LYSMD2Q8IV50 215 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 MYEOVQ96EZ4 313 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 RNPC3Q96LT9 517 aaKnown RBP7.55□□□□□ -1.2
CCDC7-209ENST00000539197 RIOX1Q9H6W3 641 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 CYP4F11Q9HBI6 524 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 ANKFY1Q9P2R3 1169 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 TMPRSS11EQ9UL52 423 aa7.55□□□□□ -1.2
CCDC7-209ENST00000539197 A0A1W2PR48 441 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 NRP2O60462 931 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 GZMKP49863 264 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 TAP1Q03518 808 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 TAS1R1Q7RTX1 841 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 SYT12Q8IV01 421 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 SYNPOQ8N3V7 929 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 SMC1BQ8NDV3 1235 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 VOPP1Q96AW1 172 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 ANO3Q9BYT9 981 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 TOR3AQ9H497 397 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 TRPM5Q9NZQ8 1165 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 PPP2R3BQ9Y5P8 575 aa7.54□□□□□ -1.2
CCDC7-209ENST00000539197 CLEC2LP0C7M8 214 aa7.53□□□□□ -1.2
CCDC7-209ENST00000539197 POU3F2P20265 443 aaPredicted RBP7.53□□□□□ -1.2
CCDC7-209ENST00000539197 GPR15P49685 360 aa7.53□□□□□ -1.2
CCDC7-209ENST00000539197 KPNA1P52294 538 aaPredicted RBP7.53□□□□□ -1.2
CCDC7-209ENST00000539197 UBE3CQ15386 1083 aa7.53□□□□□ -1.2
CCDC7-209ENST00000539197 CCDC178Q5BJE1 867 aa7.53□□□□□ -1.2
CCDC7-209ENST00000539197 ANKS6Q68DC2 871 aa7.53□□□□□ -1.2
CCDC7-209ENST00000539197 DCLRE1CQ96SD1 692 aaKnown RBP7.53□□□□□ -1.2
CCDC7-209ENST00000539197 CLCA2Q9UQC9 943 aa7.53□□□□□ -1.2
CCDC7-209ENST00000539197 ZMYM3Q14202 1370 aa7.53□□□□□ -1.2
CCDC7-209ENST00000539197 NCR1O76036 304 aa7.52□□□□□ -1.21
CCDC7-209ENST00000539197 HSP90B1P14625 803 aaKnown RBP7.52□□□□□ -1.21
CCDC7-209ENST00000539197 FBLP22087 321 aaKnown RBP7.52□□□□□ -1.21
CCDC7-209ENST00000539197 NRG3P56975 720 aa7.52□□□□□ -1.21
CCDC7-209ENST00000539197 PPARAQ07869 468 aa7.52□□□□□ -1.21
CCDC7-209ENST00000539197 TRIM25Q14258 630 aaKnown RBP7.52□□□□□ -1.21
CCDC7-209ENST00000539197 LMBR1LQ6UX01 489 aa7.52□□□□□ -1.21
CCDC7-209ENST00000539197 DHX37Q8IY37 1157 aaKnown RBP7.52□□□□□ -1.21
CCDC7-209ENST00000539197 EVLQ9UI08 416 aaPredicted RBP7.52□□□□□ -1.21
CCDC7-209ENST00000539197 TNFRSF18Q9Y5U5 241 aa7.52□□□□□ -1.21
CCDC7-209ENST00000539197 ZAR1LA6NP61 321 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 PRR5-ARHGAP8B1AHC4 643 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 RNASET2O00584 256 aaKnown RBP7.51□□□□□ -1.21
CCDC7-209ENST00000539197 TERF2Q15554 542 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 TCEA2Q15560 299 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 GPR158Q5T848 1215 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 GPRIN1Q7Z2K8 1008 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 GDF7Q7Z4P5 450 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 TARS2Q9BW92 718 aaKnown RBP7.51□□□□□ -1.21
CCDC7-209ENST00000539197 SPON1Q9HCB6 807 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 CHST2Q9Y4C5 530 aa7.51□□□□□ -1.21
CCDC7-209ENST00000539197 ZEB1P37275 1124 aaPredicted RBP7.5□□□□□ -1.21
CCDC7-209ENST00000539197 USP14P54578 494 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 RNASE9P60153 205 aaKnown RBP7.5□□□□□ -1.21
CCDC7-209ENST00000539197 CCDC142Q17RM4 750 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 BTNL9Q6UXG8 535 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 ABHD15Q6UXT9 468 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 PRIMA1Q86XR5 153 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 ZNF610Q8N9Z0 462 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 NTN5Q8WTR8 489 aaPredicted RBP7.5□□□□□ -1.21
CCDC7-209ENST00000539197 WDR11Q9BZH6 1224 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 SERHL2Q9H4I8 314 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 SYNPO2LQ9H987 977 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 AKIP1Q9NQ31 210 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 PTGFRNQ9P2B2 879 aa7.5□□□□□ -1.21
CCDC7-209ENST00000539197 GAGE12BA1L429 117 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 GAGE12HA6NDE8 117 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 TMEM200CA6NKL6 621 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 ZNF185O15231 689 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 NDUFA10O95299 355 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 ADCYAP1R1P41586 468 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 IL12RB1P42701 662 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 MANFP55145 182 aaKnown RBP7.49□□□□□ -1.21
CCDC7-209ENST00000539197 PHC1P78364 1004 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 STRIP1Q5VSL9 837 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 OLFML1Q6UWY5 402 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 Q6YL49 198 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 SLC41A1Q8IVJ1 513 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 GLB1L2Q8IW92 636 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 SUPT20HQ8NEM7 779 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 NINJ1Q92982 152 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 FANCLQ9NW38 375 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 PRSS50Q9UI38 385 aa7.49□□□□□ -1.21
CCDC7-209ENST00000539197 TMEM127O75204 238 aa7.48□□□□□ -1.21
CCDC7-209ENST00000539197 CANXP27824 592 aaKnown RBP7.48□□□□□ -1.21
CCDC7-209ENST00000539197 LSP1P33241 339 aa7.48□□□□□ -1.21
CCDC7-209ENST00000539197 OCRLQ01968 901 aa7.48□□□□□ -1.21
CCDC7-209ENST00000539197 NHLH2Q02577 135 aa7.48□□□□□ -1.21
CCDC7-209ENST00000539197 SART3Q15020 963 aaKnown RBP7.48□□□□□ -1.21
CCDC7-209ENST00000539197 ARHGEF19Q8IW93 802 aa7.48□□□□□ -1.21
CCDC7-209ENST00000539197 LCORLQ8N3X6 602 aa7.48□□□□□ -1.21
CCDC7-209ENST00000539197 RNF169Q8NCN4 708 aa7.48□□□□□ -1.21
CCDC7-209ENST00000539197 ZNF764Q96H86 408 aaPredicted RBP7.48□□□□□ -1.21
CCDC7-209ENST00000539197 EDARQ9UNE0 448 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms